NONHSAT068964
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT068964 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1511 nt |
Genomic location |
chr2+:7914945..7928655 |
Exon number |
4 |
Exons |
7914945..7914972,7915245..7915488,7917256..7917656,7927818..7928655 |
Genome context |
|
Sequence |
000001 cgctgggtgc tgaagagaca ttgctcagGA AAATTCCACT GCCACAAAAA Gtacaaggaa atatgctatg caatcctacc 000080
000081 tttatgaaat ttacaatcta gtataggaga tgaacttaaa ataattgtaa ggaagctgtg aaccatttct gcaatacatg 000160 000161 tttaagcgtg gaagggagag ttgcgaagaa ggcattaaca gcaactcacg gaaagcttca gtgggaaggt gggatgtgag 000240 000241 ctgagtcttt taggatgagc aaaaTGTGAA AGGAGGAAAA GTGACGGAAG TAGATGTTGC TTAACTCGCT CCAGACCTCA 000320 000321 CCTCCACTGT GCAATGACAC AGTGCTCACA AATGGCTGGT GGAGACCCGA ACTGGAGCCA GAGGCCAGGC AGGATACTGC 000400 000401 TTCGTGGGAG GATGAAGAAG GGCTTTGTAC TACCTGCCCC AACTTCGACA CCATTTGCAG ATGAAGCTCC AAGAAACATG 000480 000481 AAAACCAGAC AGCTATAGCG CTTTGGGTGG AGTGTGCTGC TGGGCACAGC AAATATAAAT GGCCTTAAAG AAAAAGCAGA 000560 000561 ATGGACAATG AATGCCATCC CTTAAAGCGA CGTCTTTGCT GCAGCCTCTT CATTTGCCCT CGGATTAATG CGTGATAGTT 000640 000641 TCCTGTCCCT GGTACTTGGG GCTGTGCAGT GAGGAAATAT GAAGAAAGAA AAGAACTGAA GTGAGCTACC TTGGGGCCTT 000720 000721 AGAGGGAAGG CCAGCAGTAT TGTCAACCCA TTTGGTTCTG CCAAATCATG ATGAAAGTAA TGGCCCAACC CGGCTGAGAG 000800 000801 TAAGCCCCTG TGTTTCTCTG CAGCAGATGA CTGAGAAGCA GCCAGGCTGG TCCCCATTCT GAGCTGCAGC CCAGCCTGCT 000880 000881 CCTGTTCACT TCCTCTGTCG TTCTGGGAGG TTTGTCAGCT TGCACCTCTT CAGCTCCTTC ATGCTGACAT CATGTTGGAA 000960 000961 AAGCCACTTT ACTTCTTAGA GATTCAAATA ACCCAAGCCT TGCTTGACTT GCTTCTCAGG ACAACAGAAT AGACACCAAT 001040 001041 CAGAAACTCC ATGGCAGTGT GAACTGTTTT TACCTTCCAG GCCCTGCCTT TCTCTGCTGG CTGTCTTCAT CGGGATCACA 001120 001121 CCAGAACTTC TAGCTTATca catctttgct tgactaactt caattcatcc tctaagactt agctcaggta tgacctgccc 001200 001201 tgggaagctc ctttgagacc ctcactgccc tcccaggGCC ATATGCTGAT TTTCTCTATG ACAATTTTAC ATTAAAGCCG 001280 001281 TGTGCCCATT TTGCCTACTA AACTTGGAGC TTGTTTTGCA GAGGGAAATT CCCTAATGAT CTTAATGGTA CTCTCTGTTA 001360 001361 GCCTGAAGCC TGGTATCCTG TAGACATTGA TTCTTATAAT AATATTGATG AATGAATAAA CAAATGAGAA ATTGTGAAGA 001440 001441 TGGGGCATTA TCTTTCTAAT GATCATCACT GTATTTGGTG TAACCATTCA TATTCATTTA ATGCCAAGAT A |
Predicted Small Protein
Name | NONHSAT068964_smProtein_293:463 |
Length | 57 |
Molecular weight | 6399.0313 |
Aromaticity | 0.0714285714286 |
Instability index | 53.7178571429 |
Isoelectric point | 3.96356201172 |
Runs | 9 |
Runs residual | 0.00741608118657 |
Runs probability | 0.0405307268053 |
Amino acid sequence | MLLNSLQTSPPLCNDTVLTNGWWRPELEPEARQDTASWEDEEGLCTTCPNFDTICR |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLELLLLLHHHLLLLLLLLLLLLLEELLLLLLLEEL |
PRMN | - |
PiMo | - |