NONHSAT069810
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT069810 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
738 nt |
Genomic location |
chr2+:28113654..28153228 |
Exon number |
3 |
Exons |
28113654..28113709,28117400..28117551,28152699..28153228 |
Genome context |
|
Sequence |
000001 CGCTCGGGTA CCTGTACCCC ACGTAGTCGC CGGTTACCGA TCGGACTAAG TTCCAGTGGT GATTTACAAG TCAAGTTAAA 000080
000081 ATGTCCCCAG AAGTGGCCTT GAACCGAATA TCTCCAATGC TCTCCCCTTT CATATCTAGC GTGGTCCGGA ATGGAAAAGT 000160 000161 GGGACTGGAT GCTACAAACT GTTTGAGGAT AACTGACTTA AAATCTGGCT GCACATCATT GACTCCTGGG CCCAACTGTG 000240 000241 ACCGATTTAA ACTGCACATA CCATATGCTG GAGAGACATT AAAGTGTAAG TAAATGATGA CTATTTTACT CAAAATGTAG 000320 000321 GTTACAGTGT CAGCTATTGG ACTTTGTGCT TTAGTTTTCA TTTCCGGCTG TTAGTTGTTA TCTCCTAAGA TATTGTTCAC 000400 000401 TAGCATTTAC CACTTTTCTT ATCTGCCATT CAATTCTAGT TTGATTAAAA GTAAGGCAGT TGGCAGGGAA TACGTTGTGG 000480 000481 TTAAATAGGC ATGCACAGAA ATTCCTAATA TTTAGGCATG CCCGGTAATT TTTATGTGTT TTTTTCTCTA TAGGCGGCTT 000560 000561 TTACGTAATA CTCAATAAAG AGTCCACTGC TTTAGAATAC CTGGCCATTT CGAAACAGTT TTTAGGTAGG AGTGGCTGCT 000640 000641 GTCCATCACT GCTGCTAACC CCCCTGTGGA ACCGCTGCGC CACGACTTGT CACTGATTTA TCTCCTGTTG TTACCGAAGT 000720 000721 GTAAGAGTCC TACCTCAA |
Predicted Small Protein
Name | NONHSAT069810_smProtein_80:292 |
Length | 71 |
Molecular weight | 7563.8011 |
Aromaticity | 0.0428571428571 |
Instability index | 49.1014285714 |
Isoelectric point | 9.12799072266 |
Runs | 13 |
Runs residual | 0.0408769448373 |
Runs probability | 0.0461524873291 |
Amino acid sequence | MSPEVALNRISPMLSPFISSVVRNGKVGLDATNCLRITDLKSGCTSLTPGPNCDRFKLHI PYAGETLKCK |
Secondary structure | LLHHHHHLLLLLLLLLLLLEEEELLEEELLLLLEEEEEELLLLLLLLLLLLLLLLEEEEE LLLLLEEELL |
PRMN | - |
PiMo | - |