NONHSAT069875

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT069875

Source

NONCODE4.0

Same with

,

Classification

intronic(AS)

Length

496 nt

Genomic location

chr2+:29872443..29872802

Exon number

1

Exons

29872443..29872802

Genome context

Sequence
000001 CCACTATGAC CATGTTACGC CAAGCTATTT AGGTGACACT ATAGAATACT CAAGCTATGC ATCCAACGCG TTGGGAGCTC 000080
000081 TCCCATATGG TCGACCTGCA GGCGGCCGCA CTAGTGATTC GGGAAGCTTG CATGGTAGTC TCCTTGAGGA ATAACCCCCT 000160
000161 TTTTTTCCTT AGTAGGGGGG CATTCAACTA ACTACACTGT TCTGAAGTCT GGAAGAGGAG CAGGCTAGGA CATCTCACTG 000240
000241 TTCAGGATAC AGACTCTTCC TCAACCTCCT GGTGGTTGGT ATGGTGCACC CATGCTCTCA CCTCTGCCTG GCTTGTGGAC 000320
000321 TCTGTCCTTA TATTCCATTT AGGGTCCCTC TATTCTCTCC TTCAGTTGAC TCACCTCTGC CCTCCAGCCC TTACTTTGGC 000400
000401 CCCCCATGGC CTGCTTTCCT CCCTGGCTAG CCCTCAGCTC AGATATGATA ACCCTAATAT CTTTTCATGA ACTCATGATT 000480
000481 TTTATCTTTC ACATAA
[back to top]

Predicted Small Protein

Name NONHSAT069875_smProtein_56:190
Length 45
Molecular weight 5042.8855
Aromaticity 0.0909090909091
Instability index 63.5886363636
Isoelectric point 8.04534912109
Runs 7
Runs residual 0.00401069518717
Runs probability 0.0435813965227
Amino acid sequence MHPTRWELSHMVDLQAAALVIREACMVVSLRNNPLFFLSRGAFN
Secondary structure LLLLLHHHHHHHHHHHHHHHHHHHHLEEELLLLLHHHHLLLLLL
PRMN -
PiMo -