NONHSAT070510
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT070510 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
609 nt |
Genomic location |
chr2-:46762952..46768728 |
Exon number |
4 |
Exons |
46762952..46763066,46763750..46763842,46764515..46764715,46768529..46768728 |
Genome context |
|
Sequence |
000001 ggttgtaggg aagaaaactg agacctagaa aggtgaagcg gttgtcccaa aggcttccag cTGCTCCCAG TACTCAAGGA 000080
000081 CTTGGAGCAC ACTTGGGGAA ATGCTCACTG TTGTATTCCC GTTCCTCACT ATCCAGGAGG CCTGAACTCT CAAACTCCGA 000160 000161 ATCTGATTTC CACTCTCCCA GGAAGTCTTC GGAAATCACT tttttcttct tctctatgag tcaactttct actcagcata 000240 000241 ccttctttcc tggaagcaaa atggttgcac caagtccagg catcaccatc catataccat gttttccaga aggaaagaga 000320 000321 gcttctcttg acccactcat tgaacaaagt cttgaacttc ttctgattag ctcaacttag ttcatccctg aaccagtcat 000400 000401 gGTGGATTGT CAATACAGGA GTCCATACTG ACTGAATCCC TAATTTTGGC CTGTATTCTT CTCCCTCTGT GAACCATCTT 000480 000481 CTTAGAAGTC ACTGAACCAA GAGTGCCAGA AAACCATCCC AAGACTCACA CAGAGTTGTT CTTCCATAGT GGATGTTTTG 000560 000561 GCCACTGGAC ATCAGAACCA CATTTTGGGT TTGAAGAATC TTCTACATG |
Predicted Small Protein
Name | NONHSAT070510_smProtein_215:379 |
Length | 55 |
Molecular weight | 5852.7546 |
Aromaticity | 0.0555555555556 |
Instability index | 87.462962963 |
Isoelectric point | 5.98834228516 |
Runs | 9 |
Runs residual | 0.00397470641373 |
Runs probability | 0.0491864413434 |
Amino acid sequence | MSQLSTQHTFFPGSKMVAPSPGITIHIPCFPEGKRASLDPLIEQSLELLLISST |
Secondary structure | LLLLLLEELLLLLLEEELLLLLEEEEELLLLLLLLLLLLHHHHHHHHHHHHLLL |
PRMN | - |
PiMo | - |