NONHSAT072835
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT072835 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
646 nt |
Genomic location |
chr2+:102484318..102486547 |
Exon number |
2 |
Exons |
102484318..102484499,102486084..102486547 |
Genome context |
|
Sequence |
000001 CCATGTAATT GTGCACGCTT TGTGGAATTT TAAGCCTGTC AGAGTTTTCA TTTCCTGCTT GAACTGATTT CTGTACTTCT 000080
000081 CCCTCTCCCC TTCTTTCTCC CGCGCTTCCT TGTACTGTGC ATTCCTCATC AACGATGGCT TCTCGGACTC CACGAAACTG 000160 000161 CGCTGTACTG AAGGGCGAAG TGGATCTGAC CGCACTGGCC AAAGAGCTTC GAGCAGTGGA AGATGTACGG CCACCTCACA 000240 000241 AAGTAACGGA CTACTCCTCA TCCAGTGAGG AGTCGGGGAC GACGGATGAG GAGGACGACG ATGTGGAGCA GGAAGGGGCT 000320 000321 GACGAGTCCA CCTCAGGACC AGAGGACACC AGAGCAGCGT CAGTCCCCGG TCTCTTTTAG AGCGGATGAG AGTATTCTCT 000400 000401 CAGAGCCTGC TTTCCACTGG GACCTAGTTG TTCCTAGACT ATTCCGTGAC CCCATGAGCA CTTACTATGT AGTTCTCGTG 000480 000481 GATTCAGCAG CAGGTCGCCT TGTGTTTCCC CTTCTCTTCG TTGGTGTGTG CATATGTCAG TGCTTCCCCC AGCACCCCAG 000560 000561 CGTGTACTTT ATTTTTTCCT TTTGATTTGA GGATATATGA TCCAGGGGAA ATTTCAGTTT GGTATAACTA CTTTAATTAG 000640 000641 CCATAA |
Predicted Small Protein
Name | NONHSAT072835_smProtein_134:379 |
Length | 82 |
Molecular weight | 8654.142 |
Aromaticity | 0.0246913580247 |
Instability index | 50.8209876543 |
Isoelectric point | 4.19427490234 |
Runs | 9 |
Runs residual | 0.03106859619 |
Runs probability | 0.0407073740407 |
Amino acid sequence | MASRTPRNCAVLKGEVDLTALAKELRAVEDVRPPHKVTDYSSSSEESGTTDEEDDDVEQE GADESTSGPEDTRAASVPGLF |
Secondary structure | LLLLLLLLEEEEEEEELHHHHHHHHHHHHLLLLLLLEEELLLLLLLLLLLLLLLLLHHHL LLLLLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |