NONHSAT073818
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT073818 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1388 nt |
Genomic location |
chr2-:114368816..114384715 |
Exon number |
3 |
Exons |
114368816..114369824,114383186..114383306,114384458..114384715 |
Genome context |
|
Sequence |
000001 GCAGGGAGTG CGCATGCGGC CGAGTGCGGG ACTGGGGCTC CTGGCTGTGG GTGTGGTACT GAGGCTTCAG CGGGTGCCGC 000080
000081 CCGCCTAGAG GGAGTGGAGC GGTGAGCACG TCAGGGGTGG GGGGCGCAGG TCAAGCTTTC ACCAGTTTTT AATTCTTTGA 000160 000161 TGGGGTAAAT TTGAGCAATT TTCTCGACTT GTCGACATTC GTTATTAACT GAGCAGGAAT CAGGAGAGGA ACCCGGTCCT 000240 000241 CTCCACACAG CCCAGCAGAG AGCCTACGAC TAGATTTGCA TCTTTACGTC CTGCGCGGAG GCTGCTACAC ACATGCAGAA 000320 000321 GTCATGCTGG TGGCCTGGAC ATTGAAGGGA GAGAAGTGGA TTTGGGAGAC ATTTAGGAGA TGGCACCGAA AGCGAAGGAA 000400 000401 GCTCCTGCTC CTCCTAAAGC CGAAGCCAAA GCGAAGGCTT TAAAGGCCAA GAAGGCAGTG TTGAAAGGTG TCCGCAGCCA 000480 000481 CACGCAAAAA AGAGGATCCG CATGTCACTC ACCTTCAGGC GGCCCAAGAC ACTGTGACTC CGGAGGCAGC CCAGATAGCC 000560 000561 TCAGAAGAGC ACCCCCAGGA GAAACAAGCT TGGCCACTAT GCTATCATCA AGTTTCCGCT GACCACTGAG TCGGCCGTGA 000640 000641 AGAAGATAGA AGAAAACAAC ACGCTTGTGT TCACTGTGGA TGTTAAAGCC AACAAGCACC AGATCAGACA GGCTGTGAAG 000720 000721 AAGCTCTATG ACAGTGATGT GGCCAAGGTC ACCACCCTGA TTTGTCCTGA TAAAGAGAAG AAGGCATATG TTCGACTTGC 000800 000801 TCCTGATTAT GATGCTTTCG ATGTTGTAAC AAAATTGGGA TCACCTAAAC TGAGTCCAGC TGGCTAACTC TAAATATATG 000880 000881 TGTATCTTTT CAGCATAAAA AAATAATGTT TTTCATAAGA ATGACAACTT AATTAGAATC AAATCTATAA GCTTTAAGAT 000960 000961 TTTACGTTTC TAGTAAGTAT AATATTAGCT TATTTGACTA GAACTCAAGC AGAATAGGAA TTTATGCTTG TTTTATATTC 001040 001041 AATAATGATA ATTTTGAAGA TATAGTTGTT TTATTACACC AAAAATACTA TATTAATCTT ATTTAACTAA GTTTTATCCA 001120 001121 AATCATGTTA ACTTAAGAAA CATTTGATCA GTTCCTATAT TTCTAGGAGT TTGGTGAATA TTTATTTATA AATGCTTATT 001200 001201 TTTTTCCAAG CCAAGTTAGA ATAGAGCACT TTTAGAGGAT TTCATAAATG AATTTTGCAA TGCTCTCTGG AGTTAAGAAA 001280 001281 ATATCACATA TACATAACAT ACATTATTAG ATACACAAAC ACAAATAGAG ATTTCATAGC TTTCATCCTG AAATTTCAGC 001360 001361 CATGAATCAG GCATAAATAT TCTGATGG |
Predicted Small Protein
Name | NONHSAT073818_smProtein_323:442 |
Length | 40 |
Molecular weight | 5069.2148 |
Aromaticity | 0.128205128205 |
Instability index | 76.0846153846 |
Isoelectric point | 12.1377563477 |
Runs | 5 |
Runs residual | 0.0405354449472 |
Runs probability | 0.0407878466701 |
Amino acid sequence | MLVAWTLKGEKWIWETFRRWHRKRRKLLLLLKPKPKRRL |
Secondary structure | LLEEEELLLLHHHHHHHHHHHHHHHHHHHHLLLLLLLLL |
PRMN | - |
PiMo | - |