NONHSAT073971
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT073971 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
797 nt |
Genomic location |
chr2-:120480698..120486547 |
Exon number |
2 |
Exons |
120480698..120481103,120486157..120486547 |
Genome context |
|
Sequence |
000001 tgcagcctca aactcttgag gtcatgtgat ccctcctgcc tcagcctccc aagtagctgg gactacaggt gcataccacc 000080
000081 acacctggct aatttttatt tttttctttg tacagacaaa aaagaagaaa attgggtctt gttatgttgc ccaggctggt 000160 000161 ctccaactcc tggcctcaag tgatcctccc agcttgtcct tccaaagtgt tgggattata ggtgtgagcc actgtgcctg 000240 000241 gccATGTCTG AATGTTGAAT GTTGACAGCT TCAGTGAATT GACCCCTCTT TCACCTATGG GACTTATGAA GAGAGAATCT 000320 000321 TTCTGGCATT GCATAATCCT TCCCAAGAGT ACTTTAGCTG TGGTAACCCT TCTTGTTATA AAACATGCCA GCAGATCCTG 000400 000401 GCACCCAAGT GACAACCTGC ATTGAAAAGG CGGAACTTGG CTCTCCTGCC CTGCCAGCTG TAAGAGCTTG AAAGCAAAGC 000480 000481 TATGGGGGGA ATGTCTTTCA TTTCCCCCTG GAAGCTGGGA GGACGTTCAG CTTAGCATTG CCAACTGTGT AATGTGGACT 000560 000561 TGCCTCTAAA AGAAGCCTTT TTCCTTGGAT GTCTTTCAGG CCGCAGTATT CCCTTTGGCA CCCCCACCCA CCTGGAACAA 000640 000641 AGCCTGATGT AAAGTCTGGG TGCGACTCAG ACCGGCCTGG GAAAGAATTT ATTTAATAAA TGGTGGAAAG TGGCTTCCTT 000720 000721 GACGTGTCTT CGATGGCTTT TTTATAAAGC ATTTGGTTTG TCTACTCGtc tgtttttgcg ccatctcttt ccacaaa |
Predicted Small Protein
Name | NONHSAT073971_smProtein_251:424 |
Length | 58 |
Molecular weight | 6485.5803 |
Aromaticity | 0.0701754385965 |
Instability index | 55.4789473684 |
Isoelectric point | 8.01629638672 |
Runs | 5 |
Runs residual | 0.0662280701754 |
Runs probability | 0.0752340575869 |
Amino acid sequence | MLNVDSFSELTPLSPMGLMKRESFWHCIILPKSTLAVVTLLVIKHASRSWHPSDNLH |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLEEEEEEELLLHHHHHHHHHHHHHHHLLLLLLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLL |
PiMo | ooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiii |