NONHSAT074152
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT074152 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
3239 nt |
Genomic location |
chr2+:128146043..128158154 |
Exon number |
3 |
Exons |
128146043..128146574,128146687..128146761,128155523..128158154 |
Genome context |
|
Sequence |
000001 TACTTCAGGC TTGCCACCTA ACCTTAAACC ACCCCCTTGG AGACTGGCTA AGTGTTATTT GTGTTTTCTG TTTAGTTCTT 000080
000081 ATCACCATCG ATACTTGGTT ATGACTGGTT GTGTACATTG GTTAGCCCAg caagtattac ttctccagct taacagatgt 000160 000161 ggaaacttaa gcccagagac atgagttgac ACCCCACCCC CAAAGCTAGA GTCTAAAACC CTTTCTTTCG CTCCTCATCT 000240 000241 CCCACAGGAT AAAATGCAAA TTAATCAGAC TAGTGGTGAG GCCCTCCGTG GTGTGACTAA CCTGCATCCC GACGTTTTCA 000320 000321 CCCTACTTTG ATCCAGAAAG CACCTTTCCG CCCCATCTCT TCTCCTTTCC TTAAATACCC CTTACAACTT CCTGTACCAT 000400 000401 TCTTCCCTGT TCAGCTTCTT CTTGGTTTCT TCGTACATTC TGGATCCACC CCTTTCATGC ATATTCCAGA CCACATTTCC 000480 000481 ACTGGAGCAG TTGAAATGAG AGAGATGGGA ATGGGACTCA CCCGAACCAG AGGAATTTTT ATTACAGACC CATTAACAGA 000560 000561 GGTGTCAAAG TCACAGGAAC AAGGATGTGC ACCTCAGAAA CACAGAGGCT AGCCTGGCTG AAGCTCAGCT GCACAGAGTC 000640 000641 TGTCCTGAGA AGCAGAATGC CACTGTCCCC TGGGCCCTCC AGACTGCCAA GGCTGCTCAG TTTCAGAGAG CAGGCTCCCT 000720 000721 GTGGCCTCAC ACGCCGGCTG CCAGCTGGGC CAGGTAACTC TGGCCAGGCT GCACTGTGAA GAACACGAGA GTCGGCGGAG 000800 000801 ACCTGTGCCT GCTCTTCTCA GCCTCAATGT CTGGAAGACA AAAAAAGGCA TCCTGCTCCC AAGATTGTGG TGGAGGCCAG 000880 000881 CAGGGTGACG CACATGAAAG CCACTGGAGA TAGATGGCAC TTGTTCCCAC CCACTGCCCA CAACAGGCCC AGGACTGCCT 000960 000961 CAGCCCCGGT GGACCCCAGA GCCAGCAGGC CCTTCAGAAT GGAAGGTGCC AAACACCATC GGAAGGCGTG GTTCTTTTCA 001040 001041 GAGAACCAGA CTCTGAGACT GTGGCCTCCC ACTATGAGTC ACCACCTCTG ATTCCTGAGG TCCCCTCCAG TCATTGGCTC 001120 001121 TCTCCCAAGC CAGCCAGCTG ATCAGCCTTG AGGACAGCAG AGTGTCTGCC AAGAGAGATC TGTGAAGTTT CCCATCACCG 001200 001201 TGGCAGTCCA CAATGTGAAG CCCCTGAGGC CACCCTTCTC CATGTGTCCC CCACACTGTC CCTGACCCTC CCACCATCCT 001280 001281 AGAAAACCAG CCTCCCAGGT CCTCTGTCAT GGAAGTAATT TACAGCAAGG CAGAAAGAGC TGAAAGATTT ATAAATGTGT 001360 001361 AAAATTTACA AAGGTGTTTC TTTCTTTCtt tctttctttt tttttttttt tttttttgag gcagagtctc actctgttgc 001440 001441 ccaggctgga gtgcagtggc acaattttgg ctcactgcaa cctccgcctc ccgggttcaa gtgattctcc tgcctcagcc 001520 001521 tcccaagtag ctgggattac aggtgcatgc caccacgcct agctaatttt tgtattttta gtagagacag agttttttgc 001600 001601 catgttggcc aggctggtct tgaactcctg acctcaggtg atctgcctgc ctcagcctcc caaagtgctg ggattacagg 001680 001681 cgtgagtcac cgtgcccggc cTACAGAGGT GTTTCTGAGT GGAGAAACCA CTGCCTGGTT GGACTGACTG CCCAGTTCCA 001760 001761 CCACCCTGTG AGCCCATGAG TGAGCTCACT GCACTTGTTA TAGACATCCT ACCACCAGCA GCCTGATTTT GCTGAGTCCG 001840 001841 TAGCTTACAA CTCCAATCTC ATGGCCCTGC CTTTCACCTC ACTTGCTGCC TTAAAAACCT GCAGactgag gtggcgtaga 001920 001921 agctgtgaca tcccagtacc cagaagttca tctcacaccc agatcttggt ttctaaatgt cattctctac taaaagggac 002000 002001 cagggctggt acaggagaag agcaagagct tggaatatct tatacctgag agtaaggaag tgctcagaga atcacaggag 002080 002081 cacgttaaaa ggacatagaa gtcagtttaa tgagactgct tctggccaaa gttggaacac atcaaacatt aaaacaatga 002160 002161 tggtaatgga ttagattcca tagaataaaa tccttgagga catagttata taaacataac tgaggaagaa ggaaaagctc 002240 002241 tccctaacag aataatacaa ctagtaaatg ggaaaggaaa ggagttagga attcacgctg ggtattgaaa ctagtgggtg 002320 002321 aaagctcaat gaatcggatt cttagtctca atgtctctcc tctcaattta gtaattatag tggagtaatc atgactttac 002400 002401 agtggagaaa cctggccaac actaccttca cAACACTAAC AAAAACCTTG CAGACCTGCA GCCTAAGCTC CCAGAAGTCA 002480 002481 CCTGCTGAAA TGCCTTCAAA GAGTGACCTC TCTGCGTGTA GTGCTCAGCA ACTTGGGCTC AGTGTCTATT TCCACAAGCT 002560 002561 ACAAACCAGA ATACAGTGGA ATTCAGCCCA TATGTGGTAA TTTATCTACC AATCAAGGAC CTTTGACTCC AAAAATTACC 002640 002641 TTTTTTGTAC AAGTGACTAC CTGGTGTAGA GCTcagacat ggctttgaat ttttgccatg ctgtgtgagc tcaggcaagc 002720 002721 tgcttcacct ctttgagctt caatctTtta tctataaaat gggaataaca ataacttaat gaaacagcaa ttccagtgtt 002800 002801 aggtatttcc tcaggagaaa tgaaaacacg ttcacacaaa taattgtaca tgtatgtttc tacacgcttt attcataata 002880 002881 gtcataaaca acctaaatat tcatcaactg gttagcagag aaaagagcaa accactgatg acatgaacga atttcagaag 002960 002961 cactgtgctc agtgaaagaa gccagacaaa aattacatct tacataaatt tcatttatat gaaattctag tgaaggcaaa 003040 003041 acatatagcc aggggccaag aggggaggat ggtctgcaaa gaggcaggaa cttcttcctg gggtgatggg aatattctgt 003120 003121 gtcatgaaca tcgtgattgt ggttacaaga ctatactttt gtcaaaactc atcaaattgt acacctaaaa tggatgcatt 003200 003201 AAGCCTCAAT ACAGCCaata aaagatacct acgttacag |
Predicted Small Protein
Name | NONHSAT074152_smProtein_2390:2599 |
Length | 70 |
Molecular weight | 7834.8787 |
Aromaticity | 0.0869565217391 |
Instability index | 60.6855072464 |
Isoelectric point | 9.59124755859 |
Runs | 10 |
Runs residual | 0.00559621179509 |
Runs probability | 0.0296767355591 |
Amino acid sequence | MTLQWRNLANTTFTTLTKTLQTCSLSSQKSPAEMPSKSDLSACSAQQLGLSVYFHKLQTR IQWNSAHMW |
Secondary structure | LLLHHHHHHHHHHHHHHHHHHHEELLLLLLLLLLLLLLLLLHHHHHHLLLEEEEEELLEE EEELLLLLL |
PRMN | - |
PiMo | - |