NONHSAT074444
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT074444 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1655 nt |
Genomic location |
chr2-:132127994..132129648 |
Exon number |
1 |
Exons |
132127994..132129648 |
Genome context |
|
Sequence |
000001 ATAACCTTAA TCTCCTTAAC CTTACCAATT ATTATTACCT TCATCAACCC TTACAAGAAG AACTTGTACC CATATTATGT 000080
000081 AAAAATAGCT ATCGCATGCA CCTTCACCAT TAGCCGCATT CCCACAAGAA TGTTTATATC TACAGACCAA TAACCCATCA 000160 000161 TCTCAAACTG ATATTGAATA ACAATCCAAA CCCTTAAACT CTCATTAAGC TTCAGACTAC TTCTCCATAA TGTTTATTCC 000240 000241 AGTAGCACTA TTTGTCACCT GATTATAGAA TTCTCTATAT GATATATAAA GTTAGATCCT AATATTGATC AGTTTTGCAA 000320 000321 ATATTTACTT ATTTTCCACA CCACAATATT AATTCTAGTT ACCGCCAACA ACCTTTTTCA ACTTTTTATT GGATGAGAAG 000400 000401 GCGTAGGAAT TGTGTCTTTT CTACTAACTG GCTGATGACA TGGCTGAGCA GATGCTAATA CAACAGCCCT GCAAGCGATC 000480 000481 CTACATAATC GCTTTGGCGA TATTGGCTTC ATTTTAGCTA TAGCCTGATT CCTCACATCC TCCAATACAT GAGAGCCTCA 000560 000561 ACAAATATTT ATCCTAAATC CTACCCCCGA TCTTCTTCCA TTAATTGGCC TTCTCTTAGC AGCAGCAGCA GGAAAAACAG 000640 000641 CCCAACTTGG CCTCCACTCC TGACTTCCTT CTGCCATGGA AGGCCCAGCC CCTGTCTCAG CCCTACTCCA CTCTAGCACT 000720 000721 ATAGTTGTGG CAGGAGTGTT CCTACTTATT CATTTCCACC CCTTAATAGA AAATAATGTG TTAATCCAAA CCCTTACACT 000800 000801 ATGTCTAGGG GCTATTACCA CTTTTTTACA GCAATCTGTG CTTTAACACA AAATAATATT GAAAAAACCG TAGCATTCTC 000880 000881 CACCTCAAGT CAACTGGGCC TTAGAATAAC CACAATTGGC ATTAATCAAC CACACCTAGC ATTCCTACAC ATCTGCACCC 000960 000961 ATGTCTTTTT CAAAGTTATA TTATTTGTGT GTTCAGGATC TATCATCCAC AGCCTCAACG ATGAACAAGA CATCTGAAAA 001040 001041 ACAGGACTAT TTAAGACTTT ACCCCTTACT TTCTCCTCCC TTATTATTGG CAGCCTAGCA CTTACGGGTA TGCCCTTCCT 001120 001121 CACAGGCTTT TACTCTAAAG ATCTCATCAT CGAAACCACA AACACGTCAT ATACCAATGT CTGAGCCCTC TCTATTACTT 001200 001201 TCATTGCCAC TTCCCTAACA AGTGTCTACA GTATGCAAAT TATTTCCTTT GCCCTAATAG GACAACCCCA CTTCCCAACC 001280 001281 CTAATCAACA TTAATGAAAA TATTCCTTCC CTAATAAATC CAATTAAACA CCTTATAGTT GACAGCATCT TCGCTGGGTT 001360 001361 TCTCCTTACC AATAGCATTG CCCCTGCTTC ATCCCCACAA ACAACAATAG CACCTCATCT AAAACTTGCA GCCCTAGGTG 001440 001441 TAAACATCCT AGGGCTTTTA CTGGCTATAG AACTGAGTTC TAGAATTAAT AATCTTAAAA TAAAACACCC ATTACAAATA 001520 001521 TTCAACTTTT CTAACATATT AGGATTTTAC TCAATCACAA TTCACTGTAT AACCCCTCAC TCAAGCCTAT CTATAAGCCA 001600 001601 AAACCTGGCA TCACTTCTAT TATCTAATTT GACTAGAAAA GTCCATACCA AAAAC |
Predicted Small Protein
Name | NONHSAT074444_smProtein_800:1036 |
Length | 79 |
Molecular weight | 8774.0491 |
Aromaticity | 0.115384615385 |
Instability index | 51.541025641 |
Isoelectric point | 6.94512939453 |
Runs | 13 |
Runs residual | 0.0329893683552 |
Runs probability | 0.065726359844 |
Amino acid sequence | MSRGYYHFFTAICALTQNNIEKTVAFSTSSQLGLRITTIGINQPHLAFLHICTHVFFKVI LFVCSGSIIHSLNDEQDI |
Secondary structure | LLLLLHHHHHHHHHHHHLLLEEEEEEEELLLLLEEEEEEEELLLHHHHHHHLLEEEEEEE EEELLLLEEEELLLLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHH HHHHLLLLLLLLLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTT TTTToooooooooooooo |