NONHSAT074841
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT074841 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1546 nt |
Genomic location |
chr2-:146583853..146585398 |
Exon number |
1 |
Exons |
146583853..146585398 |
Genome context |
|
Sequence |
000001 ATGGCAGGCA TGGAGGAGGC AGCGACCTTT GGGAGCTACA TGAATGGCAA CCTGGATCCA GATGAAAGGG AGGAGGAAGC 000080
000081 TGCCTCTACA ACTGAGGAAG AAGCCAAGAA AAACAGATGG AGGAAAAAGA AGAGTAAAGG GGCTGCAGCA GGGCAGCAGG 000160 000161 AAACTGATAA AGGATTAAGA GCCTCAGTGG ATGAAGGAGC AAGACAACTG GAAAGACAAG CATTGGAAAA GAAAGAAAGA 000240 000241 GATGATGATG ATGAGACGGA GATGGTGATG GAGATGGAGC AACTAGAaag aagaaggaaa agaggaaaaa gaagaaggaa 000320 000321 aagaggagga ggaggaagaa gaagaagaaa aggaagaaga agaagaggag gaggaggaag aagaggaaga agaggaagaa 000400 000401 gaacaaggag gaggaggaag aggaagagga agaagaagaa gaagaggagg aagaagaaAC AACCAAAATT CCAACAGACC 000480 000481 CTCCCTCCCT CAGTTCCAAT ATGTGGCTGT ATCCTAGTCG TGTATTTCCC AAAGGACAAG AAAGTGAATA CCCACACACA 000560 000561 CAAGATGGAT GGAGAATTAT GAGTGAAGAA AAGAAAGTGT TAGATCAGGC TAGGGAAGAG ATTTGGAATG ATTTTTGAGA 000640 000641 AGCTGCAGAA GCACATTGAC AAGTGAGAAT ATATGTAATG AGCTGGATCA AGCCTGGGAT GATAGAAATC TGTGAAAAGT 000720 000721 TGGAAAACTG TTCACACAAT CTAATAAATG AAAATGGATT AAATGCATGC CTGGCATTTC CTGCTGGAAG TTCTCACAAT 000800 000801 AATTGTGCTG CCCATTATAC TCCCATTGCT GGTGACACAA CAGTATTACA GTAAGATAAC ATCTGTAAAA TAGATTTTGG 000880 000881 AATCGGTATA AGTGGTAGGA ATATTGACTA CTGACTGTGG TCTTACTGTC ACTTTTAATC CCAATTATGA TACATGATTA 000960 000961 AAAGCTGTAA AAGATGCTGC TACTACTGGA ATGAAGTGTG CTGGAATTGA TGTTCATCTG TGTGATGTTG GTGAGTCCAT 001040 001041 CCAAAAATTT ATGGAGTCCT ATGAAGTTGA AATAGATGGG AAGACACAAC AGGTGAAACC AATCCATAAC CTAAATGGAC 001120 001121 ATTCAATCGG GAAATATAGA ATACATGCTG GAAAAACAGT GTCCATTCCG AAAGGAGGAG AAGCAACAAG AATGGAGGAA 001200 001201 AGGAAGTGTA TGCAATTGAA ACCATTGATA GTACAGGAAA AGATATGATG ATATGGGATG TTCATATTAC ATGAAAAATT 001280 001281 TTGATGTTGG ACATGTACCA GTAAGGTTTC TAAACAAAAT AATTGTTAAA TGTCATCAGT GAAAATTTTG GCACCCTCAC 001360 001361 CTTCTGCCAC AGATGGCTGG ATTGCTTGGG AGAAAGGAAA TTCTTGATGG CTCTGAAGAA TCTGTGACTT GGAAATTGTA 001440 001441 TCCACCATTG TGTGACAGTA AAGGATCATA CACAGTGCAG TTTGAACATA CCATAGTGTT GCATCCAACA TGTAAAGAAG 001520 001521 TTGTCAGCAG AGGAGATGAC TATTAA |
Predicted Small Protein
Name | NONHSAT074841_smProtein_677:853 |
Length | 59 |
Molecular weight | 6244.0352 |
Aromaticity | 0.051724137931 |
Instability index | 57.1896551724 |
Isoelectric point | 5.31231689453 |
Runs | 7 |
Runs residual | 0.035903751421 |
Runs probability | 0.043253337371 |
Amino acid sequence | MSWIKPGMIEICEKLENCSHNLINENGLNACLAFPAGSSHNNCAAHYTPIAGDTTVLQ |
Secondary structure | LLLLLLLHHHHHHHHHHLLLLLLLLLLLLEEEELLLLLLLLLLLLLLLLLLLLEEELL |
PRMN | - |
PiMo | - |