NONHSAT074922
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT074922 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
2220 nt |
Genomic location |
chr2+:151086565..151103372 |
Exon number |
2 |
Exons |
151086565..151088372,151102961..151103372 |
Genome context |
|
Sequence |
000001 TCTGTCTTGA GCAACACTAA AAAAATAAAA ACAAAACAAA GGCTAATTAC CTTTCTTTGG TTTAGTGAAG CCTCATGAAC 000080
000081 TTTATTCAGG TACAAAAGAT AGAACAGCAG AGGTAAAATC CCTGTGTGAA TGATGATTAA GTCAAGCAat acattaccaa 000160 000161 atatttactg agtacatact gtatgctggg cactagttaa gatttcagga aacaaaacaa agtctctgct cccaagaatc 000240 000241 ttgtttcgtg tatgagacag ccaatgaaaa aataaaataa aacaaaaaca tttaaaagag taccctgtag taatattaag 000320 000321 tgctacaaat aagttaataa gaaagggaaa aaaatggctg tagaagggaa ggtttatagt tcttgtttag ctacactggc 000400 000401 ctgggaaagc ttctcttgag aaggtatcat ttaagctgca ttttgaatat ggagaaggag cagtcatatg ctgggaagtc 000480 000481 aatattccaa ctagtgtgtc tgagagtaac aaacaggggg aagggtacag ggagatggct ttgagaggta acaagtgcca 000560 000561 gatcatgtac gatgtgggta gatcacAGGC aaaaaaaaaa aaaaaattaa ttaCTCAACT ATAGTGAGAT GGAAAAACTG 000640 000641 TGGTGGGGGA GACAATTAGA GAAGGCCAGT CTAGAGATGA GATATTTGAC TCTTGTAGAG TTCAAATTCA AAACCAGTAC 000720 000721 tgcaggcaga acaacttata ctgatgcatt ggatgtgaat tggaaagtga caaataaaat tggaattttg accctaacag 000800 000801 ctagatggat aacattactg tttatataaa tgttgaaaac ttggtaagaa gaagattctg gggcttgtat atgtgtgtgt 000880 000881 gtttggcaag gggatcaaca gttatttttt ggccatgtta agtttgtagt gactactaga cctccaacca gagatgtgaa 000960 000961 aaaagcaatt aaatgagtac agagtacagc aaggaagcta gatttagaaa ataacattta aaagttacca tgatggaatt 001040 001041 cattttcaaa gtcaagagac tagataaatc acttggagag tgaatgtagt cagaggagat ggccggagag atacctaaag 001120 001121 gacatcaatg tttcaacagt tggaaaagac cctgaattga aggaagcaaa agcttcctct aagcctagag aagaacttat 001200 001201 ctagaagaaa agaatcaaga gccactagga aatcaggtaa aaggaagaca aaaaaaaaat taaccactat ctttgcaaag 001280 001281 atgtgtgtca ctggaaatct taacacattg agccatatca ctggatgaaa tgggaatgta agcttgatat gaattggtta 001360 001361 aggagaaaat aggaggtaaa taactgaaaa cagcaaatac atgcagaacc tctctcaagg gtcttgctat ggagggaagt 001440 001441 agagaaatgt ggcaataaaa ggatttggag tcaacaccat ttactgttta ttttaagatc agtgatattg cactcatggt 001520 001521 ggtgggaatg ataaaaaggt aaatagggag aaagtaacga taccaaagag aaaaggaaat tctgctggat gaaagccaca 001600 001601 gagcagttat gagggcaaag gaagcagggc acaagcggag gatttgtcat agataagaac aaggccaact catctgctgt 001680 001681 cccagtagga aagaaaggca gactcgatgg gtgtaggtgc aggtaaactg gtagaattgg tggtagCTCA ATAACAAATT 001760 001761 GTAATGGTGT TCTCTTTTAA ATATGGCCAT CAATTAAGTC TTTGGAAGga ataggggttt gtttagcccg tagttctata 001840 001841 tgctgagaag atcaaggtca aggatctgtc ttctggtgag ggcattcatg ctgcattaca acatagcaga gaaggtcaaa 001920 001921 aaaaaaaaaa aaaaaggagg agacatgcaa agaggaggaa aagctgagga gcattctggc tttataacaa cccatttttg 002000 002001 agggaactaa tccattccta ggcgaacaaa tccagtctta ggaaagtgag aactcactac tacaagaaca gcaccaagcc 002080 002081 atttatgagg aacctacccc cataacccaa acaccaccca ctaggtccca cctttaaacg ctgacacatc ggggatcaaa 002160 002161 tttcaacatg aattttggtg gagaaaaaca attaatattc aaaccacagc aTAAACTTAC |
Predicted Small Protein
Name | NONHSAT074922_smProtein_353:418 |
Length | 22 |
Molecular weight | 2279.5867 |
Aromaticity | 0.142857142857 |
Instability index | 46.7619047619 |
Isoelectric point | 4.52960205078 |
Runs | 6 |
Runs residual | 0.0394557823129 |
Runs probability | 0.00840546428782 |
Amino acid sequence | MAVEGKVYSSCLATLAWESFS |
Secondary structure | LLEELEEHHHHHHHHHHHHLL |
PRMN | - |
PiMo | - |