NONHSAT075143
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT075143 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
562 nt |
Genomic location |
chr2-:161223424..161349480 |
Exon number |
2 |
Exons |
161223424..161223902,161349398..161349480 |
Genome context |
|
Sequence |
000001 TGGCCGGCGG CCGTCGCCTG GTGTGCGCGT CTGGATCCGC TGGTGGCCCG GCTTTTCGAC CCCTTCTCCA AGGGCCTCGC 000080
000081 CCTCAGTCTC TGGTCCCAGC CCACCCCATG GCCCCTCCCA GTCCcagcac caccagcagt aataacaaca gtagcagcag 000160 000161 tagcaacTCA GGATGGGATC AGCTCAGCAA AACGAACCTC TATATCCGAG GACTGCCTCC CCACACCACC GACCAGGACC 000240 000241 TGGTGAAGCT CTGTCAACCG TAAGTAGTAG TTGTTCCTAT TATTTTAGCT GCTAAGTATT TTCTTGATCA TATTATAGAG 000320 000321 TGATATATAC TGCATTATAA GAGAAGTTTA TAAGAAGTAT CTGTGGACTC TCAGTGTCAC AACAATAAAA TGGGTTTCAA 000400 000401 GTTTTAACTT CTTAAATACT TTTTGAGTCA ATATTAACAT CATCAGACTG GCTACATATC AAAATGAATT GGAGCATTTT 000480 000481 CTCAATAGAA TTTGACTTTA TGGGCATATG AGAAGTAAAA TATGAATTTT TTTAAAAAAA ACTTATGGCT AGATATTTTT 000560 000561 CA |
Predicted Small Protein
Name | NONHSAT075143_smProtein_107:262 |
Length | 52 |
Molecular weight | 5460.8878 |
Aromaticity | 0.0392156862745 |
Instability index | 62.5549019608 |
Isoelectric point | 6.49920654297 |
Runs | 7 |
Runs residual | 0.0169869928169 |
Runs probability | 0.0340802987861 |
Amino acid sequence | MAPPSPSTTSSNNNSSSSSNSGWDQLSKTNLYIRGLPPHTTDQDLVKLCQP |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLLEEELLLEEELLLLLLLLHHHHHHHLLL |
PRMN | - |
PiMo | - |