NONHSAT076148
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT076148 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1194 nt |
Genomic location |
chr2+:193323014..193336148 |
Exon number |
2 |
Exons |
193323014..193323117,193335059..193336148 |
Genome context |
|
Sequence |
000001 ACCATATTCA GAAGGTGAGA TAAGATGAGG ACCTATGGAG GGTACAATAT TTCAACAGCT GCTACTTGGA TTGGAATGAA 000080
000081 AGCTGCCCAC TGACTCAAGA AAAGAGAAGC TGCTCTCAGC TAGAAGTTCA CTATCTATGA ATTAGTGTCA CCTCTGAGCT 000160 000161 ATGCTGATCA TCAAACAGAA ACCAATTATG AAGTATGAAG GCTCACCACT AAAACAGTGT TCATGAGAAG TGATCCAGTT 000240 000241 TCTACTGAAC GGTCAAGTTG AATACATGCA GCAAAGATCA CAATGGTAGG GAAAGCAGTA CTTATCTCAA ATTATGAAAT 000320 000321 GCAATGGTTG ATTATTGGAA AGTGTGAATA GAGTAGAATC CCCTACTTGC ATATGTTCTG AAAGAATACA TCTTTTAAGT 000400 000401 CAAAGAATAT TTATATATTC TAATGAATAT TCATGTGAAG ACATGGATGA AGAAGTGCAG TAGTCAGAAT ATTCCAGATA 000480 000481 GTTTTAACAG AGTAAAAATA TTATTAGGAA TAGATACGCT TGATGTTTGC AAAGAATAAT TTAAAGAGTG ATCTGAAAGC 000560 000561 ACATATAAAG ATTAAAAAGT TAAACAGGTA GGGGAGGCAA GATGATGATG GTGGAAAGCT AGACAGATGA TGTAGAACAT 000640 000641 TAATTTACAG TTGTTGGAGA GATTTGCTGA CATTTTAAAT TTAACATGCC TACAACTTAC CTTTCCAATC TTTGTCCCAT 000720 000721 TTAATAGGAG GAACCCttgc tcaggtcaaa aacttgggag tcattcttga agcttattcc acctccaatc caataagtaa 000800 000801 ttacccttat cctcttaatt aagcttcgaa aatgtgtctt tacatgtttt ccctttccta atgctgagac tcacatctaa 000880 000881 gccagaaacg tttctcaggt ggcctctaca ataatcttcc aatcaacctg gaaaacttgg tctcttttca atccttttat 000960 000961 tctttctcta tacagagcaa gtgaAATCAA AATTTtatat aaatgtatat aaatatgtat atgtgtatAc agttcaactt 001040 001041 ttaacaacat ggtttaaact aagtgggtca acttatatgc ctattttctt ctccctttgc catgcttgtg acagcaagac 001120 001121 caagacctcc tcttcttcct cctcctcagc ctagtctact tgaagatgat gaggatgaag acctttataa taac |
Predicted Small Protein
Name | NONHSAT076148_smProtein_422:538 |
Length | 39 |
Molecular weight | 4406.1789 |
Aromaticity | 0.0526315789474 |
Instability index | 45.9789473684 |
Isoelectric point | 8.76922607422 |
Runs | 8 |
Runs residual | 0.0379155124654 |
Runs probability | 0.0404301360185 |
Amino acid sequence | MNIHVKTWMKKCSSQNIPDSFNRVKILLGIDTLDVCKE |
Secondary structure | LLEEEHHHHHLLLLLLLLLLLLLEEEEELLLLHHHLLL |
PRMN | - |
PiMo | - |