NONHSAT076554
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT076554 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1899 nt |
Genomic location |
chr2+:207117171..207129280 |
Exon number |
2 |
Exons |
207117171..207118497,207128708..207129280 |
Genome context |
|
Sequence |
000001 TTTTAGTAGA GATGGGGTTT CATCGTGTTA GCCAGGATGG TCTCCATCTC CTGACCTCGT GTTCCGCCCG CCTAGGTCTC 000080
000081 CCAAAGTCCT GGGATTACAG GCGTGAGCCA CTGTGCCTAG CCATTCCCTA GCCTTTTCGT CTTGGAATCA TTTGTAGTGT 000160 000161 CATACGCCCC AGTTCTTTCA TCTTGGAATT CTTTAGGGGA CCGTGTGCCC CAGTGTTTCC ATCTTGGGAT CACTTGCAGG 000240 000241 GCTGTGCTCT TCAAATCTTT GGGGACACTG TATTATGCCC CAGTCTTTCC CATCTTGGAA TCTTTCCAGA GACCCTATGC 000320 000321 CCAGTCTTTT TGTCTTGGAC TTATTTGCAG GGCTATATGC CCCAGGCTTT TCATCCTGGA ATCTTTTGAG AGATCGCATG 000400 000401 CCCCAGCCTT TCCATCCTGG GATCATTTGC AGTGCTGGAC TCCCTAATCT TTTTGTGTCG TAATCGTTTG CGGTGTCATC 000480 000481 TTGGAATTAT CTTGTCATCT TGGAAGTGTC TTTTCATCTT GGAATTATTT CAGGGACTGT AAGTCCCAGT CATCTGTCTT 000560 000561 GGAATTGTTT TCTGGGATGG ATGCCCCAAT CGTTTCGTTT TGGGGTCTTT GGGGAATCGT ATGCCCCAGT GTTATTGTTT 000640 000641 CAGGATTGTT TCAGGATTCT TTGCAGTACC GTGCACCGCA GTCTTTTCAT CTTAGAATCC TTTGGGGTAC TCCCGGTTCA 000720 000721 TCTTGGAATT ATCTGGAAGA CCGTATGCCC CTGTTTTTTT CAAAATACCA CAGTTTTAAA CATTTATGTT CACCTCTTGA 000800 000801 GAGACATCTT GGTTACTTCC AGTTGCCCCA GTTTTTTTGT CTTGGAATCT TTGGAGGTAC TGTATTCTCC CTCTTTTTGT 000880 000881 CTTGGAATCA TTTGCGGTGC TGTACACCCC AGTCTTCTCG TCTTACAATT CTTTAGGGGT AAAATATGCT CCAGTCTTTT 000960 000961 CATCTTGGGA TTCTTTCAGT GAACGCAGGT CCCAGTTTTT TTGTCTTGGA ATTCTTTATG GGACCACACA CCCCGGTCTT 001040 001041 CCTGTCTTGG AACCGTTCGC AGCACTCTAT TGCATGTAAT ACCGCCGGCG GCACTCTACA CGACTTGGAG CCGCCTGCGC 001120 001121 TACCGTATGC AGCACTCTCC ACGGTAGCTC CCTGGGGACT CAAACTTTTC CAGTTCCCCA TCTTTAGGCT GCAACAGCAT 001200 001201 GGCAATGCCC AATAGAAAAC AACGCAAGCA GTAGCCATCA CGCTGCCAAC ACTGGCGGTG CCCTCTTGGG CAGTGGCCAC 001280 001281 TGTCTGCTGG GCGCATTACT AAGCCCAGAG CACTCTATGA ACTCATCACT CCAGCCTGGG CAACAAGAGT GAAACTCTGC 001360 001361 CTCGGAGGGA AAAAAAAAAA AAAGAATTGA AAGAATGAAA ACCTGTCCTC AATGTGCCTG AATAAATGCT TGTTCAGACA 001440 001441 CTGGATGTGA AGTCCGATTC TCCACTGGAT ACCCAAACTG CAGGAGGTAG GTGGTTCCCA TCTGGACCCG AGTTGCCTAC 001520 001521 CAGACCATTG TCAGAAACAC AGCTGGACGT GAGTTAAAGT GGTGAAAAAA CAGATTTTAT TCAGTAACTA CTGAAAGTAG 001600 001601 GGAAGGAGCT GAGCTTATTC CGATTTCGGC AGAGGTGATT TGGGTGTTTT AAAGAAAGAA TGAGGGAGAC GGGAATAAAG 001680 001681 GAGCTCCGAA GTGTCGGGGA AGTGAAAAAG TGCAAAGGGG AGCTTCCGGA TAGCGAAGCA CGTGGAGGTT CCTGGAGGGT 001760 001761 GTCCTCCCAG AGAGGACGTG GAACCTTCCC GCTCCCACCG CGCACTTGCC CTGTGTATCT CTTCCCTTTG GCTGTTCATC 001840 001841 TACATACGTG GTAGTTTCCT TTATAGTAAA CTAATAAACG GAAATTTGCA GCAGCTGTG |
Predicted Small Protein
Name | NONHSAT076554_smProtein_11:130 |
Length | 40 |
Molecular weight | 4425.1259 |
Aromaticity | 0.0769230769231 |
Instability index | 52.4076923077 |
Isoelectric point | 8.88592529297 |
Runs | 5 |
Runs residual | 0.0405354449472 |
Runs probability | 0.0179120296767 |
Amino acid sequence | MGFHRVSQDGLHLLTSCSARLGLPKSWDYRREPLCLAIP |
Secondary structure | LLEEEELLLLHHHHHHLLLLLLLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |