NONHSAT076723
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT076723 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1800 nt |
Genomic location |
chr2+:215275801..215279927 |
Exon number |
2 |
Exons |
215275801..215276510,215278838..215279927 |
Genome context |
|
Sequence |
000001 GATTTCGACA GAGCTGGGCT CAGAAGCCAG TTGTTGGCGC TGTCCGTGGT GCTGAGGAAT TCCCGGCTGC CGGCAGAATG 000080
000081 AGCTCCAAAT CAGCAATCTG CAAACTGCTC TTACTGATGC AGAAACCCAG CTAAAGTTGC TCCTTTCCTT CACATCCACA 000160 000161 GTTAGTATTT TCCGGTGTGT AAGAGGGGAT TCAAGCAACA CACTGTGGAC GATGGTGATG GTATTGCCAG CGGAGTGGGC 000240 000241 TTTAAGCTAC AGCATGCTGT TGCTGTTTGT GATCCTCAGA GCCTAGCCAA ATCACCTCTA CTGCCGTAGC AAACACTGTG 000320 000321 TAAGTGAACT CATGTGTGGA GGAGGCGTAA TCAGCCGGGA AATTTCATAG AAGGATCTAA GAAAATGCTA AAAATAAGTT 000400 000401 CAACATGATT CTGCTACTGG GGTCTGGATT TCTACAGGAC CAGCTTTGCT TCTTGCTTTG AATTCTGAAG ACAGGTCCAA 000480 000481 AGCAAATTTC TTATATGTGT CTGCTGTGTT TCTTTCTGGA AGGGCGGGAG ACTGCTTCTT TACTGTGTTT TGAAATGGGA 000560 000561 GGTAGAGAGA ATGGATTGCC TTTAATTCAT GCCTAAAAAA TGTATTCTTT GGGTAATTAA AGAGGAACTG CTTTCTTAAA 000640 000641 ACATACCTGA CCTTTTAGTT CATTTTGGGC TGTGACCCCT ACCACCACCA TTAACCTCCA GAGTGATTAG CCTACCCCTC 000720 000721 TTGTATTCCC ATGGAAGGAG CTGAGTATAT TTAATATTAG GAGCACATCC AGAAGTCTTT GAAGAGGGGG ATGGCTCTTC 000800 000801 ATATTCATGA AGCTTGCATA CTTCTGTTGG TCATCCCTGG ATTGGTCACC TCTGCTGCTA TCAGTCATGA AGACTATCCT 000880 000881 GCTGATGAAG GTGACCAGAT CTCCAGTAAT GACAATCTGA TCTTTGATGA CTATCGAGGG AAAGGGTGTG TCGATGACAG 000960 000961 CGGCTTTGTA TACAAGTTGG GAGAACGATT TTTCCCTGGG CATTCCAACT GTCCATGTGT CTGTGCTCTA GATGGACCTG 001040 001041 TTTGCGACCA ACCAGAATGC CCTAAAATTC ACCCAAAGTG TACTAAAGTG GAACACAATG GATGCTGTCC TGAGTGCAAA 001120 001121 GAAGTAAAAA ACTTCTGTGA ATATCACGGG AAAAATTACA AAATCTTGGA GGAATTTAAG GTATGCGTTA CCCTCCATAT 001200 001201 TTATTGAAAT ATCAACTTTT CATACCACGT GCTTAGTACA TTGCTACATT AAAGTCAGAG TTGGAAAAAT GTACTTTAAA 001280 001281 ATTTCCCTTT AAATTATACA ATTTGATTCT AATTACCATA AGTAGCACCA TGGTCAACAA ATGGCCAACT GGTTTGTTGA 001360 001361 TCATATTTGT TAAGTTGCAC AATAACCTTT ATTTTTTTTC CCAGAAGTAT TTGGGGCATA CCTAACACCT TTTATTTTTG 001440 001441 CCCTTAAACA TTTCTTCTCT GTTATTACAA AATATGTTTT CTGATGGGAA CAATTTTGTG TATAGTGTAT GTGTCTCCTA 001520 001521 AATTAATTTT TTAATTGTGT CAGTTTTGTG TGTTGCTTAT TAGCCTGTAT TTGAAGTCAT TTAACAATAT AGTCTAGAAT 001600 001601 TATTTGTTTA TTGTGTGGAA AAGCTACAGA GATATACTTC TTAGCTGTGG TCCTCATATT AAGAAAATGC ATTGGGCCTA 001680 001681 CTTGTGGTCA AGCAAGATCC CCATTCTGTT CTCTGCTCGC TGGATTTTTT GCTTTCAGGA TTCCACAGAG AACTGAATTT 001760 001761 TTATCACAAT CCATGTAAAG AGTAGTAAAA AAGACTGTAA |
Predicted Small Protein
Name | NONHSAT076723_smProtein_806:919 |
Length | 38 |
Molecular weight | 4304.3169 |
Aromaticity | 0.108108108108 |
Instability index | 59.7108108108 |
Isoelectric point | 9.62652587891 |
Runs | 6 |
Runs residual | 0.017604760724 |
Runs probability | 0.053421068127 |
Amino acid sequence | MKLAYFCWSSLDWSPLLLSVMKTILLMKVTRSPVMTI |
Secondary structure | LLEEEEHHHLLLLLHHHHHHHHHHHHHHHHLLLLLLL |
PRMN | LLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLL |
PiMo | ooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiii |