NONHSAT076747
Contents
Annotation
Name
NONHSAT076747
Alias
NA
Disease
Disease: papillary thyroid cancer (PMID:27758138)
Dysfunction type: NA
Description: The lncRNAs NONHSAT076747 was associated with lymph node metastasis.
Function
Function Mechanism: NA (PMID:27758138)
Biological Process: pathogenic process
Description: therapy target
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Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT076747 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
629 nt |
Genomic location |
chr2-:216229093..216230240 |
Exon number |
2 |
Exons |
216229093..216229708,216230228..216230240 |
Genome context |
|
Sequence |
000001 AAGTGTGACC CTCATGAGGC AACGTGTTAT GATGATGGGA AGACATACCA CGTAGGAGAA CAGTGGCAGA AGGAATATCT 000080
000081 CGGTGCCATT TGCTCCTGCA CATGCTTTGG AGGCCAGCGG GTAAGACTGG ATGTGCCAGG CTCCCTACAA GTTAGATAAG 000160 000161 ATAAAGGGTG GGCTCCTGCA AGGATGTGTC GTACACACAG GAGGGGCAGA GACCCTTCGG AAGTATTAAA ATACCACATT 000240 000241 TCCTGTTGGC ATACAACTGC TGACATAGAG CTCTAGAGCA GCTCTATGTC TACCTTACAT GCCATTCATT CTTTCTATTA 000320 000321 CTCTTAGTAG AAAGAATGAA TGAATGGCAT GTAGAGTACC AAAAACACAA GTCTTGAGTC ATTCTTAATA GCAACACCTG 000400 000401 TCATTTATAT GATGTTAGAA TCATTTTCCT AAGCTCCCTA GCATGTCAGA GATACTATTT ACACTGAAAA ATAGTGAAGC 000480 000481 AGAGATACTA TTCAAATTAA TTAGTGGTAA ATAGAATGTG TTTCATTTCA GCCGGTTCTC CCCATCCTGG GCAGCCTGAG 000560 000561 ACCCTCCCCT CCCCTACTAT TCTCAGGCTG CTTCTATTTT TCAGCAAAGT GTTAAGTGCA GTGTagctc |
Predicted Small Protein
Name | NONHSAT076747_smProtein_515:625 |
Length | 37 |
Molecular weight | 3855.5676 |
Aromaticity | 0.0833333333333 |
Instability index | 62.5527777778 |
Isoelectric point | 7.99945068359 |
Runs | 5 |
Runs residual | 0.0415695415695 |
Runs probability | 0.015562621445 |
Amino acid sequence | MCFISAGSPHPGQPETLPSPTILRLLLFFSKVLSAV |
Secondary structure | LEEEELLLLLLLLLLLLLLHHHHHHHHHHHHHHHLL |
PRMN | - |
PiMo | - |