NONHSAT076794
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT076794 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1936 nt |
Genomic location |
chr2+:217080782..217084704 |
Exon number |
2 |
Exons |
217080782..217081687,217083675..217084704 |
Genome context |
|
Sequence |
000001 TTAAAATGTG CACAAGAACA GGCCACAATA TGCAGCTAGC TGAAGTGCTG GAAAACCTGG CATGCCTTTG AACTTCTACA 000080
000081 GGAGTTCCTG CCCCTAGTGG GTAAGTTACC TATTGCACTG ACTTTATGAA GATATCTCTT CCAGTGCCCT TAGTGTGAGC 000160 000161 ATCCCCACAA ACCTTATGAA CCAGTTGAAT CCAACCTGAA TGCCTCTCCA TAAGCCCGGA GCCCACAAAT GCATTTTCTC 000240 000241 CAGGGCCCTT GGATGGAGGG AATCAGGAAG GCCTCCTCCA AACCCAAGGC TAGGAGAGAT GTTCCCTCCG GGGTCCAGGG 000320 000321 AGGAGAACAG AAAGGACTGA GAAGAACTAG GAATGCCCTC CCAAACCCAA GGCCAGCAGG AGGGTCTCCT CCGGAGTTCC 000400 000401 ACAGATGGAG GAGGCCTAAA AGAAGAAATC AAGTCTGCAA CCTAAAAGTG GGAGATCTTG GATTTTGATA GCACTTACCC 000480 000481 AGATCCTTTC CCAGCATAGT CAGGAACAAC TGGACTTTTT CAAAGGGACC TTGGCTGTAC CTGGTGTCCT GGGTGACACA 000560 000561 GGAAAAGGAA TTCAGGGGCT GCTTCAGAAT CCCATCTTTG CCAGATACGT TAACTTTAAA AAAAAAATCA TAAGATACAA 000640 000641 ATTTAGAAAA ATGGAGACAC TATTTCTTAA GGGTGACAGC CTGCCAGGTG GCCATCCTGC AGGCCAGGAA GCACAGCCTC 000720 000721 CTCCAGCAGA AGCCCAGAGA CAGGCACCTC CAAGGAGGAG GGGTTGGGGT AGGAGTTTTA TGCTTTTATG CTGAATGGGT 000800 000801 TGGCTTAACA CATATTCAAC AGGTTACAGG AGGAGCTATG AATATTAATG AAAGTGGTCC TGATGCATGC ATATTAAACA 000880 000881 TGCATCTTAC ATATGACACA TGTTCACCTC TCTCACACAC ATACACATAT ACATTGTTAT TCCACACACA AGGCATAATC 000960 000961 CCAGTGTCCA GTGCACATGC ATACACGCAC ACATTCCCTT CCTAGGCCAC TGTATTGCTT TCCTAGGGCA TCTTCTTATA 001040 001041 AGACACCAGT CGTATAAGGA GCCCACCCCA CTCATCTGAG CTTATCAACC AATTACATTA GGAAAGACTG TATTTCCTAG 001120 001121 TAAGGTCACA TTCAGTAGTA CTGAGGGTTG GGACTTCAAC ACAGCTTTTT GGGGGATCAT AATTCAACCC ATGACAGCCA 001200 001201 CTGAGATTAT TATATCTCCA GAGAATAAAT GTGTGGAGTT AAAAGGAAGA TACATGTGGT ACAAGGGGTG GTAAGGCAAG 001280 001281 GGTAAAAGGG GAGGGAGGGG ATTGAACTAG ACACAGACAC ATGAGCAGGA CTTTGGGGAG TGTGTTTTAT ATCTGTCAGA 001360 001361 TGCCTAGAAC AGCACCTGAA ATATGGGACT CAATCATTTT AGTCCCCTTC TTTCTATAAG TGTGTGTGTG CGGATATGTG 001440 001441 TGCTAGATGT TCTTGCTGTG TTAGGAGGTG ATAAACATTT GTCCATGTTA TATAGGTGGA AAGGGTCAGA CTACTAAATT 001520 001521 GTGAAGACAT CATCTGTCTG CATTTATTGA GAATGTGAAT ATGAAACAAG CTGCAAGTAT TCTATAAATG TTCACTGTTA 001600 001601 TTAGATATTG TATGTCTTTG TGTCCTTTTA TTCATGAATT CTTGCACATT ATGAAGAAAG AGTCCATGTG GTCAGTGTCT 001680 001681 TACCCGGTGT AGGGTAAATG CACCTGATAG CAATAACTTA AGCACACCTT TATAATGACC CTATATGGCA GATGCTCCTG 001760 001761 AATGTGTGTT TCGAGCTAGA AAATCCGGGA GTGGCCAATC GGAGATTCGT TTCTTATCTA TAATAGACAT CTGAGCCCCT 001840 001841 GGCCCATCCC ATGAAACCCA GGCTGTAGAG AGGATTGAGG CCTTAAGTTT TGGGTTAAAT GACAGTTGCC AGGTGTCGCT 001920 001921 CATTAGGGAA AGGGGT |
Predicted Small Protein
Name | NONHSAT076794_smProtein_899:1078 |
Length | 60 |
Molecular weight | 6804.992 |
Aromaticity | 0.0847457627119 |
Instability index | 62.7661016949 |
Isoelectric point | 8.64227294922 |
Runs | 7 |
Runs residual | 0.0258124708443 |
Runs probability | 0.0633532692357 |
Amino acid sequence | MFTSLTHIHIYIVIPHTRHNPSVQCTCIHAHIPFLGHCIAFLGHLLIRHQSYKEPTPLI |
Secondary structure | LLLLLLEEEEEEEELLLLLLLLEEEEEELLLLLLHHHHHHHHHHHHHHLLLLLLLLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLL |
PiMo | ooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiii |