NONHSAT076962
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT076962 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1647 nt |
Genomic location |
chr2+:219828142..219829788 |
Exon number |
1 |
Exons |
219828142..219829788 |
Genome context |
|
Sequence |
000001 CTAGGGTCAC TCCGCGGCTG TCGGCTGTCG CCATAGTAAC CAGACTGAGC GGGCTGGGCA GCCGCTCTAC TCTCCCACCT 000080
000081 CTGGCTGGGG AAACAATCCT GGTCCACCTT ATTTGGAACT AGCTAGTGAG ACTAGCTATT TGATTAGAAT TTCTGAATTG 000160 000161 GAGGAGCCTA AAGGGGATGG GAAAGAGAGC AGAGACCCTA CAGAGACGCC CCCCTCAACC CCCAACAAAC ATCCTGCCTT 000240 000241 CGGATACTGC CCCTGAACTC TTAGACACAG CACCCACCCT TTACTGCACA CACACACCCC TCCAGGAACT TGTGGTCTGG 000320 000321 CACCTGGAGA CGTAGAATGA GAAAAAGGCC ACAGTGAGTA ACATTTAGTT AAATCTCACT TTTGACATGC CCCAAGGCAT 000400 000401 GAAACACTGC CATAATCCGA TTAGGAGGGG AGGGACTGGA GAAGGATCAA CAAGAATACA TGGAAGAATT AGCCTCCTGG 000480 000481 GTCAGACTTA TCGGAGTCCT GTTTTCTCAG GGATTGAGTG GGAGAAGTTG TAAGGAGAAA GACCCAGAAC AGTCTTCTGA 000560 000561 GAAGGCAAGG GGAGGAGGGA GTAAGTGCAG AAACAGAATA AGGTACCTTC TTTCCTGACG CTGAGTTAAC CTGGGGAAAG 000640 000641 TGAGTCCAAG CTGCTGATAA GGTGGTGCAG GGGGACCAGA ATTTTAGAGA GAAACCAGAA AGGAAGAGGG GTGGACTAAG 000720 000721 GAAAAGATGG AGGTGGAGGA AAGGAGACAG AAACCCAGCT GGAGCAATGA CTCAGCAATT CCCCTAAGCA AAGGGCTGGA 000800 000801 GTGACTCTCC CAGCACAGGA GCAGCTGTGA GGGCAGGAAA GCAAATGGAC AGATAACCGG TAATTCACCC CTTCACATGA 000880 000881 CACATGTTGA TGCGTACACT GACGCATAAC CAAAGGCACA CATTTTAACC CAGAAGTGGA CACAAATGCA TTTATACTGG 000960 000961 TGAATCATAA CATATACACA CCTCTACTCC TTTCCTCCCT GTCCCCCTTC CTGGAACAGA GGACATTCTG TTTTGGAGCC 001040 001041 ATGTTCCCCT GTCCCTGGAA TACCTCGCTA CTTATTAGAA AAGCAGAAAT GCAAAAAATC ACAGACATGT GGGGGGAGTT 001120 001121 GTCATGGTAA CTGCTTTGCC TGCCAGGCGG GGTGCCCAGC AACCAGAGCA TCTAACAGTA TTCAAGAGGA CATCCTGTGG 001200 001201 TCTCCACTTA CTGGGATCCT ACCCCAGGCA ACCAGATGGG CAGCTTTTGA AGATGTCTGC AACAGAGGCT GCTGAAGAAG 001280 001281 CCCCTCCAGT CACATCATCA TGATCAGGGA CAGCTGGAAG CCAGGTGTAT GGGCCTGATC TTCTTTAGGT ACCCCACTTT 001360 001361 AAGTAGCACT TCTGGTCTCT TTAAATATAG ACGTTTGCTG TGAGTGGCTT CAAGACAGCA GGATTAACAC TTCAAAGGCC 001440 001441 CTTATTTAAG AACATGACCT gactgggagt ggtggttcac acctgtaatc ccagcacttt gggaggccga ggcgggtgga 001520 001521 tcacttgagg ccaggagttt gagactagcc tggccaacat ggtgaaaccc tgtctctact aaaaatacaa aaattagctg 001600 001601 ggtatggtgt tgcgtgcctg tactcccagc tactcgggac tcaggag |
Predicted Small Protein
Name | NONHSAT076962_smProtein_176:334 |
Length | 53 |
Molecular weight | 5877.6618 |
Aromaticity | 0.0384615384615 |
Instability index | 91.2346153846 |
Isoelectric point | 5.43316650391 |
Runs | 10 |
Runs residual | 0.041938287701 |
Runs probability | 0.0269298710475 |
Amino acid sequence | MGKRAETLQRRPPQPPTNILPSDTAPELLDTAPTLYCTHTPLQELVVWHLET |
Secondary structure | LLLLHHHHLLLLLLLLLLLLLLLLLHHHHLLLLLEEELLLLHHHHEEEEEEL |
PRMN | - |
PiMo | - |