NONHSAT077791
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT077791 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
2127 nt |
Genomic location |
chr2-:240115027..240117153 |
Exon number |
1 |
Exons |
240115027..240117153 |
Genome context |
|
Sequence |
000001 ATCCCCACCC ACCCGGCTCC CAGGATCCTC ATTAGGAAGC CCTCAGGAGC CCTGGGGTGG GTCTCCTTGC CCTGTGAACG 000080
000081 CTCCATTTGT GTTATTGAAT CCAACATAAA TGCAGCATTG TCTTCAGAGG TGAGCAATGG CCGTGGCCGG AGGTGCGCAT 000160 000161 GGGATGCAGG CGGCGTGTGC TGCTGTTGAT TTTCTCTGCT CTGCTCTTAG CTTACTTTAG CAGATAGTGG AGTTTCACGT 000240 000241 GGCAGTCCGG TAAACCAAGG CAGTGTGAAC ATCCCTTCCC CACAATGAGT GAAAATGCAG GAGGTGCCGT AGTGAGAACA 000320 000321 GCGACAGCAT TCTGCGCATT GGTGAGCCCG ACTCCCCAGC CTCGGTGCCC ACCGAAGCCC CCTCTGGCTG CACTGTGCCA 000400 000401 GTGAGTCCAG GCTCCTTCTC AGCAGAAGGT GGCTGCTCTG CAGGGCCCCT CGCCTCCCTG CTCCTCAGGG GACCCGCACT 000480 000481 CTTCCATGTC CGTAGGGAGA CGCGCACCGA GCTGGAGACA CAGATCTGCG AGGAGTAACT TGCCTCTCTC ACCAGCACTG 000560 000561 CCAGGGGCGG ATCAGCGCCA GCACCTTCCA GCATGCGCTA AACTGCTGGA GAAGCTGGAG TGGCTGGAAG GAGCCCTGCC 000640 000641 TGCCTGCCCT CCTCCTCCTC AGTTGCTGGC CTTGGCAGCT CTAGGGTGAC CCAGCAGGGG CCTGGAGGAG TAGGAAGCAG 000720 000721 CTTCCCAGCT GCAGTCTGCA TCATCCTCTC TGTGCTGTCA CAGAATGGAA GGTTTTAGCA GAAAAAGGAG TTTGTAAGCG 000800 000801 ACATTCAGAA GATTTGGGCA GCAGTTTCTT CCCCCATAGG GTCCTGTCTT TTGGGAGTGG GGAGTGCTGG GCCAGGCTGC 000880 000881 TCGCTGGCTG TTTCACAGGT GGTGGAATTT AAGAGCAGAC TTGGGTCGAG CTGTGACCGT TCAGGTGATG CACGCACAGG 000960 000961 AGGTTCAGCT GTGTGCCTGT GAGGCGGGCA GGAGCGTCAC CCAAGCTTCA GAAGAGAATT CCCCGGCAGC AGCGTGGCGC 001040 001041 TCAGCATGTT CCGTGTCTGA CTGTTTTGAT TGTCTCTCAG TCCAGTTGAC AAATTCCTTT TAAGATGAAA TTTGAATTAA 001120 001121 TTTGCAGAAC TTGTACAAAT CTCCAAGAAA ACAGCTTAAG GAACAGATTA AAGAATGAAT GCCTTAGGAA TTAAAGCATT 001200 001201 AATAGCTCTT GAGTAGACTG GATGGAAAGA TGAGTTGTGT AGGTTATCCA GATGAGGCTA CATCCAGGGA GCAATTCTTA 001280 001281 CCTTCAGAGG GCGCTGCCTG TCCTCCTTGG CATCCAAGTG AGCGCATCTC CTCCACGCTC AATGATGAAT GCTGGCCGGC 001360 001361 ATCCCTGTGA GGAACCTTGT GATCATTTTC CATTTCTGAA AACTCCCAGG TGGTGGGGGC CCTTGGCCCA CATCAGCATT 001440 001441 GACCACCCCG GGCTCAGATC TGGCCAGGTG CCTGCGTTGT GATGGGAATT TCAGTACACT GAATTTTGCC TCTGACCCTG 001520 001521 ATGAAATAGC TTCGGTGGCA TTTGCATCAA GATCATGTTA GTGTCATCTC TATTAGATGC TTTGGAGCAA ACATGAACTT 001600 001601 GGGTTTCCTT TTAAGATGTC CTGTGATTCC AGATTCAGGG GAATCTGAGA AAAGTTTGAA GAAAGAAAAT TCCACTCGGC 001680 001681 CAGCCAACCT TGGGTGTGCA GAGCCTGCCC CGCCTTCCCC ACTTTGTCCT GAGAAGCTGG GTCCTCCCCA GCACCAGAGT 001760 001761 TGCTGCTGCT TCCCCTCGCG CTCTTGGCTG CTCTCCCGGC CCCAAGCCTG AGTGACACTC TAGGATTGCA GATGGCAGGC 001840 001841 TGGTCTCTGG GCTCCCCCGT CCCCATGACC CTCCACCTGC ACCCAGACCT CTGGGTCCTT GCTCAGGCAG CCCCTGCCCT 001920 001921 CGGTGAGACG CAGCCCACTG TGGGCCCTTC CCCTGGGCCT GCCATCAGCT CCTGTGCTCC TCGGCGCCCC AGCGGCTGCC 002000 002001 CTGGGCCCGT TCCCACAGCA CCTGGCACAC AGCAGGAGCC ATGAATGTTC TTTGGGAACT GAATGAGGAG TGGAAATGCG 002080 002081 GGCATGTCAT GTTTTTGAAG TTAATAAAAA AAATCCCTTA AAAGTTG |
Predicted Small Protein
Name | NONHSAT077791_smProtein_1592:1810 |
Length | 73 |
Molecular weight | 7803.9561 |
Aromaticity | 0.0416666666667 |
Instability index | 90.8222222222 |
Isoelectric point | 8.28912353516 |
Runs | 9 |
Runs residual | 0.0159164639092 |
Runs probability | 0.042424777719 |
Amino acid sequence | MNLGFLLRCPVIPDSGESEKSLKKENSTRPANLGCAEPAPPSPLCPEKLGPPQHQSCCCF PSRSWLLSRPQA |
Secondary structure | LLLLEEEELLLLLLLLLLHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLEEL LLLLEELLLLLL |
PRMN | - |
PiMo | - |