NONHSAT077898
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT077898 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
2196 nt |
Genomic location |
chr2+:242157600..242164599 |
Exon number |
2 |
Exons |
242157600..242157796,242162601..242164599 |
Genome context |
|
Sequence |
000001 gggcgcgcag gggcggagcg ggggCCGCCT CGCGCTGACC CCTCCGGCGC CCAGGCCTTC CTCCTGGCCT TCTCGTCCGA 000080
000081 CTTCCTGCCG CGCGCCTACT ACCGGTGGAC CCGCGCCCAC GACCTGCGCG GCTTCCTCAA CTTCACGCTG GCGCGAGCCC 000160 000161 CGTCCTCCTT CGCCGCCGCG CACAACCGCA CGTGCAGGTA TCGGGCTTTC CGGGATGACG ATGGACATTA TTCCCAGACC 000240 000241 TACTGGAATC TTCTTGCCAT CCGCCTGGCC TTCGTCATTG TGTTTGAGGT AGCCGAGGCA CCTGCTGGTT CTCCCATCCA 000320 000321 TGGCATGAGG CCCCGACCCT GTGCTTTGCC TAATTCGAGC ACGTGGTGAG GGGTCGGTGC CGTCACTTCC TGCTGTGTCA 000400 000401 TCTTGGTCAA ATCAGAGCTC TTCTCTGCAC CTGCGTTTTC CCTGCCTGGC CTCATCCCTG GGTTGTGGTG TGGACATTGT 000480 000481 GGGTGTCTCC ACAGGAGCCC CAGGGCCACG AAAGCTGGGG TGGCCTCTGC CCCTTCTGGG GTTCCTTTTC CTGCACAGCT 000560 000561 GCTTTCTGAC TCCACCCACA GCTGGGAGCA GGTGCCGGAG CCCCGGCCTG CCTGGCCCTG TGAAGGCCAC TCTGGGCGTT 000640 000641 TGGGTGGGCG TGAGTGCCTT CCTCTGCTCC CAGCATGTGG TTTTCTCCGT TGGCCGCCTC CTGGACCTCC TGGTGCCTGA 000720 000721 CATCCCAGAG TCTGTGGAGA TCAAAGTGAA GCGGGAGTAC TACCTGGCTA AGCAGGCACT GGCTGAGAAT GAGGTGAACT 000800 000801 GTACAGCCCA GTCTCGGCCC TCCCCCCAGC CCTCTCCCTA TCCTTGTCAG TGGCTGCTCT ACCTCCGGAC ACTGAGTCAC 000880 000881 ATCCCTCTTC CTCTTGCTGC CCTTTTTTGG GGACAGGTTC TTTTTGGAAC GAACGGAACA AAGGATGAGC AGCCCGAGGG 000960 000961 CTCAGAGGCA AGTCTGGGAG CAGCCAGGCC CCTGCCCCGT GCACTCCCTG AGGTCACAGG GCCCTGCCCA GCCGCCCACT 001040 001041 GTGCCTCGTG GCCATGGCCT GCTCCTGGCC CTAGTCTGAC TTGTCCCTGC CCCCAACCCT CTCCCCAGCT CAGCTCCCAC 001120 001121 TGGACACCCT TCACGGTTCC CAAGGCCAGC CAGCTGCAGC AGTGACGCCT GGAAGGACAT CTGGTGGTCC TTAGGGGAGT 001200 001201 GGCCCCTCCT GAGCCCTGCG AGCAGCGTCC TTTTCCTCTT CCCTCAGGCA GCGGCTGTGT GAACCGCTGG CTGCTGTTGT 001280 001281 GCCTCATCTC TGGGCACATT GCCTGCTTCC CCCCAGCGCC GGCTTCTCTC CTCAGAGCGC CTGTCACTCC ATCCCCGGCA 001360 001361 GGGAGGGACC GTCAGCTCAC AAGGCCCTCT TTGTTTCCTG CTCCCAGACA TAAGCCCAAG GGGCCCCTGC ACCCAAGGGA 001440 001441 CCCTGTCCCT CGGTGGCCTC CCCAGGCCCC TGGACACGAC AGTTCTCCTC AGGCAGGTGG GCTTTGTGGT CCTCGCCGCC 001520 001521 CCTGGCCACA TCGCCCTCTC CTCTTACACC TGGTGACCTT CGAATGTTTC AGAGCGCAGG GCCGTTCTCC CTCGTGTCCT 001600 001601 CTGGACCCAC CCGCCCCTTC CTGCCCTGTT TGCGCAGGGA CATCACCCAC ATGCCCCAGC TCTCGGACCC TGCAGCTCTG 001680 001681 TGTCCCAGGC CACAGCAAAG GTCTGTTGAA CCCCTCCCTC CATTCCCAGT TATCTGGGTC CTCTGGATTC TTCTGTTTCT 001760 001761 TGAATCAGGC TCTGCTTTCC CCCTAGCCAC TACAGGCAGC CTCTGACAGT GCCGCTTTAC TTGCATTCTG CAGCAATTAC 001840 001841 ATGTGTCCTT TTGATCCTTG CCCAACTTCC CTCCCTCTCC CAGCTCCTGG CCCCTGGCCC AGGGCCCCTC TTGCTGTTTT 001920 001921 TACCTCTGTT CCTTGGGGCC TAGTACCCAG CAAGCACCCA AATGGGGGAG GTTTTGGGAT GAGAGGAGGA AACGTGTATA 002000 002001 CCTGTAACAT CTGGTGGCTC TTCCCCCAGA AGTTTGTGTT CATACATAAT TGTTTTCCAC GCTGGATCAT AATGTGACGT 002080 002081 GCAGTTCTGC CCTGTGCTGG GGAGCCACAT GAAGCTTCCC CTGGCTAACT TGCTACCCCG CAGCAATCCC AGTGTGGCCG 002160 002161 TCTGCTTGCT AAAAAATGGA TCTGTGCTCA TCTGTA |
Predicted Small Protein
Name | NONHSAT077898_smProtein_944:1078 |
Length | 45 |
Molecular weight | 4737.4311 |
Aromaticity | 0.0227272727273 |
Instability index | 81.1181818182 |
Isoelectric point | 11.524597168 |
Runs | 5 |
Runs residual | 0.0494652406417 |
Runs probability | 0.0361420243774 |
Amino acid sequence | MSSPRAQRQVWEQPGPCPVHSLRSQGPAQPPTVPRGHGLLLALV |
Secondary structure | LLLHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLEEEEEL |
PRMN | - |
PiMo | - |