NONHSAT078102
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT078102 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1110 nt |
Genomic location |
chr20+:1340276..1342621 |
Exon number |
2 |
Exons |
1340276..1340464,1341701..1342621 |
Genome context |
|
Sequence |
000001 TCATTCCTTT TTATGTTTGT TTTTGCTTTC ATTTGAATTG TCACTATCCT ATGCTCTTGC CTGACAGACC CTGAGAGCCT 000080
000081 ACTGACCACA GCAGCTCCTG TTACCACGGC TGCCGTTTCT GCTCTCAATG CTACTGCTCA TTGATCCCAG GGAGGAAAAT 000160 000161 TCTGGTGCAT CACTTAGTAT TTATTTCAGA TTTCAACCAA AACAACATAT TGCAAGATTG AATGCAGAAG TAGATGTGAG 000240 000241 AACTCATTCT ATTAAGCCAA GCGTAAATGT TTAAAAATGT AAAATAATAC CACTCTTCTG ATATGTTTTG GGAGAAAATA 000320 000321 TGTTTGTGGA AAATATACCT ATCAAAGAAA TATCAGAAAC CTTCCAAACT GAAGGACATG TGTATCCAGA TTAAAATGAC 000400 000401 CTTCCAAATG CTTAACATAG TAAACAAAAA ACAGGAGGAA AAGGAGGGGA GAAAAGAAAA AAAGAAGACT CACACAAGGC 000480 000481 CGTGTTACGA CATTTCATCA TACCATAGAT AAATCAGATC CTGAAAGATT TCAGAAAGGA ATATGAGATC ACACATAAAG 000560 000561 GAACAGGAAT CAAAATGACA TTACCCTTCT CAACAACACT GGAAGCTCCA AGAGAGTGCA GCAATGCTTT CATCCTCAGA 000640 000641 GAAAATAATT ATCAATACAA AATAATATTC CCAGCTAAGC TATCAATCAT GAGGGTAGAA GAAAGGCATT TTTAGCCATT 000720 000721 GCGTGGGAGT GCTATAATAA TGGTCCCAGT GAACCACACC TCCCTGTATC CGCACCACTT TGCAATGAGA AATTTGCTGT 000800 000801 TTCTCCTAGT GAGAGAGGGA GTCTATTTCT TTACCCTTGG GCCTGGGCTG GCCTGGTGAC TTGTTTTGAC CAATACATGG 000880 000881 AAGAAGTGAC ATTATGTGAG TTCTGCAGCT GAAGCTTTAA GAGGCCTTGA AGTTTCTCCT CACCTTCTTG GAACCTTGAG 000960 000961 ACCACCATGC TGTGAGAAGC CTGGGCATAT CTACTGGAGG CCGAGGGGCC ACATGACACG TCTAAAACTC ATACGTCAAG 001040 001041 ATATGGTAAT ATAATGTGAA ATTCCTAGAG CAGCTTAATG CTAGTCTCTA TTTGGCTACC TTTTTCTTTA |
Predicted Small Protein
Name | NONHSAT078102_smProtein_302:511 |
Length | 70 |
Molecular weight | 8587.1848 |
Aromaticity | 0.115942028986 |
Instability index | 45.8492753623 |
Isoelectric point | 9.80389404297 |
Runs | 11 |
Runs residual | 0.0200889654183 |
Runs probability | 0.0434712787656 |
Amino acid sequence | MFWEKICLWKIYLSKKYQKPSKLKDMCIQIKMTFQMLNIVNKKQEEKEGRKEKKKTHTRP CYDISSYHR |
Secondary structure | LLHHHEEEEEHHHHHLLLLLHHHHHHHHHHHHHHHHHHHHLLLHHHHHLLHHHLLLLLLL LLLLLLLLL |
PRMN | - |
PiMo | - |