NONHSAT079330

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT079330

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

3107 nt

Genomic location

chr20+:30588084..30591190

Exon number

1

Exons

30588084..30591190

Genome context

Sequence
000001 GTTTTTCTTT CTGTGACACA GTCTACCTCA GCCAGTCTCT CCCCTAGCAG AACTGACCCC CCTGGTCCTC TGCCTCCTGT 000080
000081 CCCCTGACCC CCACCCCAGT CTGGATGTTC AGTCCTTCCC TGTCCTTCCC ACCCTGCCAG GGTCCTTGCA GCCCAGAGGG 000160
000161 TCCCTGAGGG TTCCTTAAGC CACCTGCCCT CCACATCCAT TAGACAGGAG AAAGTGAGAC CCAGAGAGGA CCAAGGACTC 000240
000241 ACCAAAGGCC ACACAGGAAG TCAGTGGCAG TTAGGATTTC CCTGGGGATG AGAGGTAGTT GGGTGTGTCT TAATTTTGCC 000320
000321 AGGAACAGAA GAGAACAGGA TGCTTTGGGT ACCAAATATG GCAGGCCCTG CCCTCAGTTA CCTCTAACCC CAGGAGACCA 000400
000401 GTGTCCCCAT CTCCAGGGCA GACTTCTGTC TACCTGTTTT CTTAGAACTG ACCCCCACGC TGTTGACTGT GTTCCCCAAA 000480
000481 CCTCTGCAGG CACCACACAC ACCCACATCA CGGCGCCTCC TGGCACTGAT GTGCCATGTG CCTTGTAACT GTCACCCCAG 000560
000561 CTGAACAGCA CAGACCTCCC CACTCCCCCA CACAGGGCTC CCCAATGAGG GAGCCTTGCT TGATCCCCTC CTGTCATCTG 000640
000641 CCTCATTCTT GTGTCTCCCC CAAATCTGCC TTACCCCCAG CCAGCTCCCT GCTACACCTG TGTCCCACAG AGGCATGTCA 000720
000721 CCCATGAGAG TCGGGAAAGA CAGAGGGCAG GGAAGGTGAG GCCTGGGGAA AGTCCAGGCC TCTGGATAAG GGCTGAGGGA 000800
000801 GCTGGGAATA TCCAGGGAAG GTCTCGCTTG CAGTCAACAC CCTCCTAAGT ACTCGAGTTC TGCAGGTTCT TCCCTTGGAA 000880
000881 TTAATCTGGA CCTGGAGTCC ACAGAAGCCT CAGACAATAG GGAGAAGGTT TTCTGGGACG AAGGCTGCAT GGGATGCAAA 000960
000961 CTCAAATGCC TCGAGATAAT GAAACTAAGA GTAATGGAGA CAATAGGGAG TGTTGGGGAC TCTGGCAGAC AGGAGAGTGA 001040
001041 GTGTGTGCCC TGCCTGTAGG TACTAAAATT CAAATGTTTG GGAAACTGCT GGCCACTCAT ATTTGGCCCA CGTGCCACCA 001120
001121 GTTTGAGACT TACGGTTCAA AATGTTGAGA AGGTTCTGGA GTGTCCTGCC AAGTGGAAAC CCCTCTGCGG AAGTCAGGGA 001200
001201 CAGAGGCTGT GGCTCCCTCT GAGACTTTGC TAGTCCAACC CTAAATCCCC ATCACCTGGC TATCTGAGAA CTGAGCCCAC 001280
001281 TGCCCTCTCA GCTGAAAAGG GAAATCTGGG GGGTCCACAG GGTCCCTGGT TTGGGAATCA TCTGATAAGG GCTACAGGCC 001360
001361 CCTCCAGTGC CTCATGGGGT TAGAGGCTGC TGGAGTCTTC TCCAGCTTGG GGGCCCCTGG TTAGGAGGAA TCTACATTGG 001440
001441 GTTGCAGGGG AGTCCAGGTG CAGGATGTGG ACTGAAAGCC AGGACCCAAG AGTCCCATTC TGTGCTGGCC CCTGCCACCT 001520
001521 TTGGCACCTG TCTCCCTCCC AGTTCAAGCT GTGGTGGGGC CTGCAGTAGA GGTTGGTAGG GGGAGCTGTA GTTTCTATAT 001600
001601 TAAAGTGCTT TGCAGTGTCT CAATGGAAGG GAACAAGTGG GTGTCAAGCC GCATGGGCAG TAGTAGGGTT GGGGTTTGAG 001680
001681 CCCCCTTCCC AACCATAGAG GCTTCTGAGA CCTGGGGCTG GGGAGGAAAG GAGCTTCAAT GTGCCATTCT GGTTGGGGAG 001760
001761 AGGATAGGAC ATTTCTGGGT CCTTGGCTGC TGCCGGTAGA GGTATGGGGA GGAAAAACTC TAGAGTGGGA GATGTGGAAG 001840
001841 TGGAAAAGGA AGGCCCTGTC CAGGCCTGGC CTGGTTTCTG GAGACAGAAA ACTCCCCAGG GGACAGAGAG GTTACCCCCT 001920
001921 TGTGCTTAGC TTCTGCCACC CTTCCCTTCT CTGGAGGAGA AGGCTGCCCT CTCCTCAGCA ACCCTGGCCT TTATTCTATG 002000
002001 CATAACCACT GCAAGGGCAC CCCTGGCCAG GCTGAATGGG TGGGGGTCCC AGGGCACCTG CAATAATCTC AGAATGGAGG 002080
002081 GTATCCTGGG ACAAAGAGGG GGTACAGAAG GTGCCAGGGG GGAAAAGGTG ATTCCTCCAT CTCCCTCTCA CCCAAATCCC 002160
002161 CCCAGATCGA ATCTGACCCT TTTCCCTGGT CTCCATTGTG CTAAACCACC GAACTTGGAG GAGCCTCATA TAAACACAGC 002240
002241 CCCCAGCCCC ACTGGCTTTC CGAACCCATC ATGAAATAGC TGGAAGGTAT CTGAACCGTT CCCATAGCTC CCTCATTATT 002320
002321 TTCTTCCCTG AGGATCCTGT GGTTTAGGAG ATTTTTCTCC CAAACCAGCC TCATTTCTTG AAGAAGAATT CATTTTCCCA 002400
002401 TATTAAATTA ACTCAAGCTG AGCTTCTGAT TGCAGATAAA TGTTTCTAAG GCCTCAAGTC AACTTCTAGG GCTTGAAGGT 002480
002481 GGGGGAATAT ATGTATTTTA TTGAGTTGCT TAATACAAAA TTCTCAAAAG CACTTGTGGG CACTCATTCC TGCCTTCACA 002560
002561 GGCCCTCAGG GTCTGGGACC CCACGTTGGG AATCAATGGT TTAGACATCC AGCATCCTAT TTTACTGAAG GGGCAAGCCC 002640
002641 AGAGATGGGA GATGGCCAGC CCAAGGTCAC ACAGCAAGTT GGTGGCAGGG TGAGACCAGA ACCCGGTTCT TTTGAGGGTC 002720
002721 CCACCAGAAT ATCCCCAGCC CTGATCCTCC CCTCCATGCC CCTGGAACTC TAGGAATCAC TAGCCATGCC TGAGGGGCTA 002800
002801 ATCTCCCTCT GTCAGCACAG TTCCGAGTGA TTCTTCCCCT CCCTGTCGTC TCTTCCTCCC TAACGGGCCC TCACCCCTGT 002880
002881 CCTCTTCTGT TTCCTTTTCC TGGTCCCACC TCCTGGTATT TACTACATCT GTGCCATCCC TCATCCCCCT GACCCCCATT 002960
002961 CACCCTCCGA GCTTCCCCCA GGAGGGGGAG GGGGAGGGGG CCCCGAGCTG GGGCCTCTTT ACTGAGACTC TTTTGTACAC 003040
003041 CACAAACTTT TTGTATATTT TTAATTTTGC TGCGACATGA GATATTAAAA GTCATTTCAG TACGTGC
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Predicted Small Protein

Name NONHSAT079330_smProtein_287:547
Length 87
Molecular weight 9352.5804
Aromaticity 0.046511627907
Instability index 43.5534883721
Isoelectric point 8.31317138672
Runs 9
Runs residual 0.0349704963554
Runs probability 0.0411293646588
Amino acid sequence MRGSWVCLNFARNRREQDALGTKYGRPCPQLPLTPGDQCPHLQGRLLSTCFLRTDPHAVD
CVPQTSAGTTHTHITAPPGTDVPCAL
Secondary structure LLLEEEEELLLLLLHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLEEEEEEEELLLLLLL
LLLLLLLLLLEEEELLLLLLLLLLLL
PRMN -
PiMo -