NONHSAT080011

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT080011

Source

NONCODE4.0

Same with

,

Classification

sense

Length

2510 nt

Genomic location

chr20-:44978167..44981836

Exon number

2

Exons

44978167..44979529,44980690..44981836

Genome context

Sequence
000001 attttatcag taaggaaact gaggtccaga aaggggacac atctcagccc aagtcccaca gctctgtact agcaagacct 000080
000081 agattaaaaT GAACGTTTGT AGGGATAGAA TTTTGTCCCT GTTTGTAGGT GAACTGGCTG AAATGTAGAC CAAGGAGTTC 000160
000161 CCTGAGTGGG CTGGGGCACT GTTGGTCCTT CGTCACTTGG TAGCCGCCCT ACCTTCTTTA GCCCAGTAGT TACCACAGCT 000240
000241 CCAAAGACCC CATGAAGTCA GCAGCCATGA GCCCCTCCCC ACAGACCAGT AAGGGAATAC TGTCCAAAGG TGCAGGGCAC 000320
000321 TTCCATCCGT CTTTCCATGC AGGGCCACCC CCCTCTACTT CACCCCAGAG GCTCAGACGA GCCCTCCCCA TCATTCCGCT 000400
000401 AGGATCCCCA TCATCCCACT AGGATCTCCA TCATCCCGCT AGGATCTCCT TCATCCCACT GGGATCTCCT TCATCCCGCT 000480
000481 AGGATCCCAT CATCATCCCA CTAGGATCCC CATCATTCCA CTAGGATCCC ATCGTCATCC CGCTAGGATC CCATCGTCAT 000560
000561 CCCGCTAGGA TCCCATCGTC ATCCCGCTAG GATCCCATCA TCATCCCGCT AGGATCCCAT CATCCCGCTA GGATCCCCAT 000640
000641 CATCCCGCTA GGATCCCATC ATCCTGCTAG GATCCCCATC ATCCCGCTAG GGTCCCATCA TCCCGCTAGG ATCCGCATCA 000720
000721 TCCTGCTAGG ATCTGGCTTG TATTGCCCCC AGGCGCTCTG GCAGCCATCA CTGCTTCCCT GGTTTCCCCA GGTCTCAGGC 000800
000801 CATCTGTGTG GGATCACTTT ATACCTTCCA TGCTTTTTCT CTGGGCTGCA GACAGTTAGC AGGTCTCAGT AAGAACTCAC 000880
000881 TACTACAGTG GAAGATCTTG TGTGGTTGGC ATTGGGCTGG CCAAGGCAGC CCAGGACCCG GCCTCCCACT CTCTCTCCCT 000960
000961 GTTGCTTTCA GGTCTCCATT TGTCCACATC TGAGAAAATC TTCCGTTTCC AGGACACAGG GCTGCTCCTG CGGGTACTTG 001040
001041 GGAGCCTCTT CCTTGGCGGG ATTCTCGCCT TTGGTTTGGG CTTCTCTGAG TTCCTCCTGG TCTCCAGAAC CTCCAGCCTC 001120
001121 ACTCTCTCCA TTGCCGGCAT TTTTAAGGAA GTCTGCACTT TGCTGTTGGC AGCTCATCTG CTGGGCGATC AGATCAGCCT 001200
001201 CCTGAACTGG CTGGGCTTCG CCCTCTGCCT CTCGGGAATA TCCCTCCACG TTGCCCTCAA AGCCCTGCAT TCCAGAGGTA 001280
001281 ACCCAGAGTC CCTTCCAGAA GCCTCTGTTT TCTGTTCTTC TCCCTGTGAC TCTTAGTGAT TCTGATGCAG GAAGTGTGCC 001360
001361 CGGTGGCTCT GCTGCCGTCA CTCCTCTAGG AAGATGTGGG GGTCATCTCC AGAGTGGGTG GGTGGGGCCT GGGTGACTCA 001440
001441 GCACACATGC AAATCAGAGC AAACCAAGAA AACCACGACT GGGCCTGTAA CTGTGGTCTC TCTCTATCCC AAGGTGATGG 001520
001521 TGGCCCCAAG GCCTTGAAGG GGCTGGGCTC CAGCCCCGAC CTGGAGCTGC TGCTCCGGAG CAGCCAGCGG GAGGAAGGTG 001600
001601 ACAATGAGGA GGAGGAGTAC TTTGTGGCCC AGGGGCAGCA GTGACCAGCC AGGGCAAATG GCTTAGAAGC AGGCCACTCC 001680
001681 CCAGCCTGCT GCCAGCACTC ACTGTGCTCA AGCCGCCAGG GCTCATCATG GTAGCTGGGA GCTGTGGACG GGAGTCACCA 001760
001761 GGTGGTGGGG CCAAGCCAGG GACTCATGAC TTTTGCCCCT CCCTTCAGAG CCTGGTCACA CAAGGGGCGA GCACCAGGCC 001840
001841 AGCCTGGGAC TGGCCAGAGC TGGGCCCAAG CTGCGCTGGA ATCGCAGCAG GAGAGGGGAG TGGGCTGGTT CTTCCCACCA 001920
001921 CTTCCCAGGC TCTGACAGCC GAGACTCATT TCCAAGGCAC AGCAGCTTTC TAAAGGGACT GAGTTTGGAC TGGGTTTTGG 002000
002001 ACCTCCAGGG GCTGGAGCTT CATCACCTGG GCAGTGTCTT TTCTCAGAGA GCAGGTTTCT TTATAGTTTG GAAATAAATG 002080
002081 GTTCACGGTC CACTGGCCGC CTTGTGTTGC TGGAGACGTG GGGGCAGGGA GGGGACAGTG TGGGCCTGGC CTCTCCTTTC 002160
002161 CTTTCCCTGC CTGGAGCCTT CTTCAAATGT CTGGTCTTAA GCCAGGCCTC CTTCATTTTC TCGCTCCTGT TAGAACACCA 002240
002241 GTCCCCTCCC CAGTGGGGCC CCACTGCACC TGCTGGCAGG AAATAAATGA ATGTTTACTG AGTACTGCAT TCTGGAGACC 002320
002321 TTACATGTTT TCacagccta gtttgaatac tggctttgtc actagctgtg tgaccctaag caaatgacct aacctgtctg 002400
002401 tgccgtagtt ttttaatctg tgaaatgggg ataatgtcta tctcagagtc cttttgaaga ttgagtcatt attagtaaca 002480
002481 gattaaatgt tATATAAGCA TTTCTTTTAA
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Predicted Small Protein

Name NONHSAT080011_smProtein_1727:1972
Length 82
Molecular weight 8044.8271
Aromaticity 0.0617283950617
Instability index 45.7222222222
Isoelectric point 4.96673583984
Runs 9
Runs residual 0.03106859619
Runs probability 0.0266933600267
Amino acid sequence MVAGSCGRESPGGGAKPGTHDFCPSLQSLVTQGASTRPAWDWPELGPSCAGIAAGEGSGL
VLPTTSQALTAETHFQGTAAF
Secondary structure LLLLLLLLLLLLLLLLLLLLLLLLHHHHHHLLLLLLLLLLLLLLLLLLLLEEELLLLLLE
EELLLLLLLLEEELLLLLLLL
PRMN -
PiMo -