NONHSAT080026
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT080026 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(AS) |
Length |
928 nt |
Genomic location |
chr20+:45204733..45205779 |
Exon number |
2 |
Exons |
45204733..45205638,45205758..45205779 |
Genome context |
|
Sequence |
000001 CGAAATGATG GGATGATTTT TATTTCCTCG CAagtggcag cgctgcagtg gtgaggacag tgggcggggg agtcaacaaa 000080
000081 ctttctgcag ggggttagcg agtgaatcat tgaggctttg caggccacac agtctctgtt gtcactactc cgtcgttgta 000160 000161 gcatgaaaac agccagagac catacctaaa cgtgtgggca tggttgtaaa taaaactcta tttacaaaag caggtggtgg 000240 000241 gttggacctg gcacgtggct ggtagtgtga catccctggg ttgggggcat aggcttggag acagaccttc ctcagtcttg 000320 000321 gcttactgca tgcccttgac aagtgacttt gcctccctga gccccatttc ctcagccggc acatggCACA GTTACAGAAC 000400 000401 CGGGGAGTCC CTGTGAACAC GAACCAGGAC AATGATGCAT CTGCAGGGAG ATGAGGCATT TCCAGTTAGC TGATAgttgc 000480 000481 atccacaggg tctagaacag tgcctgacac ctgatggtaa ctccgtaaat atttgtcaaa taatgtacat gacacactta 000560 000561 gacccatgcc tggtgcaggg taatcactcc tgaaatagga cttttcttGG CAGGCTGTGA CCAGGGAAGC AGGGAGGATG 000640 000641 GGTCTGACTC CTTTAAGGCA GTTTACCATC TCCCAGGACA CTTCCTGGTC AAGCAGTTAT GGAAATTTTG CTTCTCCTTT 000720 000721 TGAGCTTTTT CCAAACGTTA CACAGTGGTC TACCTAAAAC AAGATTTTAT AGTCAGGAAA TAAAGATAAT AAAAGCTACT 000800 000801 TAATAAAATC CTTCTACCAG CAAGCATGCA GTCCACAAGT GTATGCAGCC CACAGGTGTA TGCAATCCAC AGGTGTATGC 000880 000881 AGTCCACAGG TGCATGCAGT CCACAGGTGT ATGCAGCCCG CAGGTGTA |
Predicted Small Protein
Name | NONHSAT080026_smProtein_698:802 |
Length | 35 |
Molecular weight | 3980.7558 |
Aromaticity | 0.117647058824 |
Instability index | 45.7914705882 |
Isoelectric point | 9.52288818359 |
Runs | 6 |
Runs residual | 0.00967982129561 |
Runs probability | 0.0374344933169 |
Amino acid sequence | MEILLLLLSFFQTLHSGLPKTRFYSQEIKIIKAT |
Secondary structure | LHHHHHHHHHHHHHHLLLLLLLLHHHHHEEEELL |
PRMN | - |
PiMo | - |