NONHSAT080185
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT080185 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
537 nt |
Genomic location |
chr20+:47522654..47523190 |
Exon number |
1 |
Exons |
47522654..47523190 |
Genome context |
|
Sequence |
000001 TGGGCCCTGC CTacctagca tcgcttctgt catattctgt tagcaacact ctccaaagcc caaccagttt caaggggagg 000080
000081 ggatgtagac ctcacctttc aatgagaaga gtgtcaacga atttgtggac tttatttcaa aacagccaca ACAACTAATT 000160 000161 CCTGATAAAA ACTGAAAATA TGACATAATA AGGCTTTAAC CACCCCCACG Tttgtttatg tgtttatgat ctgtttccca 000240 000241 cgctacaaat taagcttgat gagggtaaag acttgggcat tttgcccact gcagtgtccc tgaggccaag gacagggcTG 000320 000321 AAGAATTACA CGGTGATTAG ATCAGAGGAA ATATCACCGT CTCCCCTCCT CCTGTCTATT TTAGGCCAAA GCATCCTTCA 000400 000401 ACATCCAGCT CACAGCTCTT CTCCGTGGTC TTCTAAACTC CAGTTTTTCT TTGCCTATTC ACCTGAGGGT CACTTTGTGC 000480 000481 TATACTAAGT TGTCACGTCT TAAATtacag catccagtat taccagttca gctgctg |
Predicted Small Protein
Name | NONHSAT080185_smProtein_101:157 |
Length | 19 |
Molecular weight | 2218.4539 |
Aromaticity | 0.111111111111 |
Instability index | 46.6888888889 |
Isoelectric point | 12.0000610352 |
Runs | 5 |
Runs residual | 0.0116959064327 |
Runs probability | 0.041688747571 |
Amino acid sequence | MRRVSTNLWTLFQNSHNN |
Secondary structure | LLEEEELHHHHHHHLLLL |
PRMN | - |
PiMo | - |