NONHSAT080457
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT080457 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
666 nt |
Genomic location |
chr20+:55092243..55101131 |
Exon number |
4 |
Exons |
55092243..55092257,55093143..55093353,55099946..55100113,55100860..55101131 |
Genome context |
|
Sequence |
000001 CTCCCAAAAG CACAGCAATG AATGAGAGCT CTTCTGGAAA AGCTGGGAAG CCTCCGTGTG GAGCCACAAA GAGGTCCATC 000080
000081 GCTGACAGTG AAGAATCGGA GGCCTACAAG TCCCTCTTTA CCACTCACAG CTCCGCCAAG CGCTCCAAGG AGGAGTCTGC 000160 000161 CCACTGGGTC ACCCACACGT CCTACTGCTT CTGAAGCCCG CACTGCCACC GCTCCTGCCC CAGAAGAAAA CTAGCGAACC 000240 000241 CCAGGGGAAG GTGCAATACG GAGAGCACTT TCGGATTCGG CAGAATCTAC CAGAGCACAC CCAAGGCTGG CTTGGGAGCA 000320 000321 AATGGCTCTG GCTTCTTTTT GTTGTTGTGC CGTTTGTGAT ACTGCAGTGT CAAAGAGACA GTGAGAAGAA TAAGGAGCAG 000400 000401 AGTCCTCCTG GCCTTCGAGG CGGCCAACTT CACTCTCCAT TAAAGAAAAA AAGAAATGCT TCCCCCAACA AAGACTGTGC 000480 000481 ATTCAATACC TTAATGGAAC TCGAGGTGGA GCTTATGAAA TTTGTGTCCA AAGTGCGGAA TCTTAAACGT GCCATGGCAA 000560 000561 CAGGTAGTGG CAGTAACCTC AGGCTTCGAA AGTCAGAGAT GCCTGCAGAT CCATACCATG TCACGATCTG TGAAATATGG 000640 000641 GGAGAAGAAA GCTCTAGCTG AATGGA |
Predicted Small Protein
Name | NONHSAT080457_smProtein_17:193 |
Length | 59 |
Molecular weight | 6326.8431 |
Aromaticity | 0.0862068965517 |
Instability index | 66.025862069 |
Isoelectric point | 7.82049560547 |
Runs | 7 |
Runs residual | 0.035903751421 |
Runs probability | 0.0305852070558 |
Amino acid sequence | MNESSSGKAGKPPCGATKRSIADSEESEAYKSLFTTHSSAKRSKEESAHWVTHTSYCF |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHLLLLLLLLLLLLLEEEELLEEEL |
PRMN | - |
PiMo | - |