NONHSAT080714
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT080714 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
667 nt |
Genomic location |
chr20+:60758085..60769109 |
Exon number |
2 |
Exons |
60758085..60758113,60768472..60769109 |
Genome context |
|
Sequence |
000001 CTCCGGAAGT GACGTGCTTT CCCGAGCCGG GGCCATGGCA CCTGCAAGGT GTTTCTCAGC AAGATTGAGG ACCGTGTTTC 000080
000081 AGGGCGTGGG GCATTGGGCT TTGTCCACAT GGGCTGGCCT GAAGCCCAGC CGGCTACTGC CACAGCGGGC TTCTCCCAGG 000160 000161 CTGCTCTCGG TCGGCCGTGC GGACCTCGCC AAGCATCAGG AACTCCCGGG GAAGAAGCTG CTCTCTGAGA AAAAGCTGGT 000240 000241 GAGACTCCTG GAGTTAGAGC AGCTTGCCTG TCTCCTCCTC AGAAGGCACA GGGTGTGGTT TCGGGTCCTC CTCTGGGTCT 000320 000321 CATCTCTGTT GATGTTAGTT GATGATCTTA GTGATGGGGC ACGTGGAGCT TCTTGAAAAT GACAGGGTGA AACGCAGGCC 000400 000401 TGCGTGCTAA ATCCCACGCT CAGCAAATCC CAGCAGGCTG GGAGAGGCGC TGCGTGCTTG GAAAGCCGTg atacaggctg 000480 000481 ctcattttcc catgagcctg tgtattttac atgtatgtta catatatcct ttcatatgtg tggctatttc ttaatttaaa 000560 000561 acaaatGCGG Aggctgggca cggtggctca tgcctgttat cccaacactt tgggaggcta aggcaggcgg atcacttgag 000640 000641 gtcaggagtt cgagaccagc ctggcca |
Predicted Small Protein
Name | NONHSAT080714_smProtein_341:409 |
Length | 23 |
Molecular weight | 2580.1047 |
Aromaticity | 0.0 |
Instability index | 91.9 |
Isoelectric point | 7.99993896484 |
Runs | 5 |
Runs residual | 0.00909090909091 |
Runs probability | 0.0265147500442 |
Amino acid sequence | MILVMGHVELLENDRVKRRPAC |
Secondary structure | LEEEELHHHHHHLLLLLLLLLL |
PRMN | - |
PiMo | - |