NONHSAT080862
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT080862 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
779 nt |
Genomic location |
chr20-:61992798..61996658 |
Exon number |
3 |
Exons |
61992798..61993390,61993780..61993883,61996577..61996658 |
Genome context |
|
Sequence |
000001 GTGGGGGACA GGGGAGGCCA GCAGAGAGCA GACGCATGAC GTTTGGTGTG AAGAGTGCCA GGAAGACAGT CGGGCAGAGC 000080
000081 AGGCACTGCC CACAGAGCGG ACAGACAGCT CTGGCCAGTG AGGAAGAGCT CCTGCCCGTC CCAAAGCAGG TGTATGAGGA 000160 000161 GCCATGAGCT CAACCTGGAA CCAgagAGCC TCGCCCTCTC CTCCTGCACA CGAGATTCAG CCGCACAAGG CGCCCCTCCT 000240 000241 CCAACGCACC TGCTGCTCTG TGGGCGGCCA CCTCGGCACC CACCTGAGGG CGGGGCCCCT CCCTGGGGAC CGTGCGCCTG 000320 000321 GGCTCCCCTC TGGACGCCTC TTGGGTCTCT GCGGAGGTAC CAGGGAAGGC GGGGGCTGCA GGCGGACAGA GAGTCCTGAA 000400 000401 CGGCTCGCTG GGGAACAAGA CCAGAGACGC GATTTTCAGG CTGCAGACAC CGGCTGGCGC GATGGAGTAA CCCAGATGTG 000480 000481 CTAGGGGTGC CCCTCCTTGC GCCGGATCCC CTAGATGTGC CCCCCACCCC TGCAGGCAGG GAGCGGGCGC CCAGGCTGGA 000560 000561 GATGTGGGGA GGGAGGTCAG ACTGACTCCG GGACCCCCCA GTCGCACTCA GTGACCCCGG GGTCCCCGTC CCCGGCTCAG 000640 000641 GCACGTCTCG AACCCCAGGA GAACAAGGAA ACTTTACCCC CGCCCGGGGC CCAGCGCAGC CTCCCCGTCC CCCTGGGCGC 000720 000721 GCGGTCCATC CCTGCTCATT CTCCCTGGCC CTTGCTCCCT CCTCCCTTTT CACTCTCCG |
Predicted Small Protein
Name | NONHSAT080862_smProtein_35:166 |
Length | 44 |
Molecular weight | 4715.2817 |
Aromaticity | 0.046511627907 |
Instability index | 93.0534883721 |
Isoelectric point | 6.53460693359 |
Runs | 8 |
Runs residual | 0.0287431408414 |
Runs probability | 0.0429915209328 |
Amino acid sequence | MTFGVKSARKTVGQSRHCPQSGQTALASEEELLPVPKQVYEEP |
Secondary structure | LEEEEEEHHHLLLLLLLLLLLHHHHHLLHHHLLLLLLLLLLLL |
PRMN | - |
PiMo | - |