NONHSAT081149

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT081149

Source

NONCODE4.0

Same with

,

Classification

sense

Length

1992 nt

Genomic location

chr21+:15588451..15600693

Exon number

5

Exons

15588451..15588603,15591874..15592046,15593418..15593490,15596759..15596858,15599201..15600693

Genome context

Sequence
000001 AGCCGGAGAA GGGGCGGGGT CTCAGCTCCT ACTTCATTCT ACGGCCGAGA CCGGAGGATG TTCCCTGCTC AGGAGGAGGC 000080
000081 CGACAGGACC GTGTTTGTTG GGAATTTAGA GGCCCGAGTT CGGGAAGAGA TTCTGTACGA GCTGTTCCTT CAGTTTCTTA 000160
000161 TAGGCGGGGC CACTAACCAA AGTGACTATA TGCAAAGACA GAGAAGGAAA GCCAAAGTCT TTTGGATTTG TCTGCTTTAA 000240
000241 ACACCCAGAA TCGGTGTCTT ATGCCATAGC TTTGCTGAAT GGAATTCGTT TATATGGAAG ACCAATTAAC GTGCAGTATC 000320
000321 GATTTGGGAG TTCTCGCTCT TCTGAACCAG CTAACCAAAG TTTTGAGAGC TGTGTTAAGA TAAATTCACA CAACTACAGG 000400
000401 AATGAAGAAA TGTTGGTGGG CAGATCTTCC TTTCCCATGC AGTATTTTCC AATTAATAAT ACTTCTTTAC CTCAAGAATA 000480
000481 TTTTCTCTTT CAGAAGATGC AGTGGCATGT GTATAATCCA GTGCTGCAGC TTCCTTACTA TGAAATGACA GCTCCACTTC 000560
000561 CTAATAGTGC ATCCGTGTCT TCCTCACTGA ATCATGTTCC AGATCTTGAG GCTGGACCCA GCTCATATAA ATGGACTCAC 000640
000641 CAACAACCAA GTGACTCTGA CCTTTATCAG ATGACAGCTC CACTTCCTAA TAGTGCATCC GTGTCTTCCT CACTGAATCA 000720
000721 TGTTCCAGAT CTTGAGGCTG GACCCAGCTC ATATAAATGG ACTCACCAAC AACCAAGTGA CTCTGACCTT TATCAGATGA 000800
000801 ATAAACGAAA GAGACAAAAG CAAACAAGTG ATAGTGATAG TAGCACAGAC AACAACAGAG GCAACGAATG TAGCCAAAAG 000880
000881 TTCCGAAAGT CTAAGAAGAA GAAAAGATAC TAGTATTACC TACAAATGAA ACTTACCTAC ACTGATCTTA GTTCTCTTAT 000960
000961 GAAAAAAATA AGATGTTATC CCATCAAATA AACAATGTCA TGGCTATCTT GTCTTTTGAA ATATGTAGTA ATAAGACTTA 001040
001041 TCTCTGGTTT GCTGTTCAAT TTTTGCCTTG AACGACAAAA GCTTTCTAAA AATAGTATAA TGTACCACTT TTTGTATTTG 001120
001121 TCATGATATT TTTGACCCAT TGGCAACAAA TAGACTATTG TCATTTTATT AGTACCAATG ATGAAATTTC ACCAAACTAT 001200
001201 TAATCAAAAG TCACTTATTG AACACATTGA TAAAGCATCA TGTTCCCTTT GATTATCCCC TATAACCAAC ACTCAACTAC 001280
001281 AAATAGGCTG GGATTCAATG TGGAGTGGTG GATTTCCTGA AAGAAAGTAG TGCAGATATT TAAGGATTGC ATATTGTTCC 001360
001361 TAATGAGGAT GTAATAAACA GGCATTAGTA CCCCTTTCTT TTAGTACCTA AATATGTTGT TTCTGAGCCA TATTCTTCTT 001440
001441 CAGGTTTATT TTATAAAGTG AGGACATATG ATAATGATAC CAAAGGAAAG ATAATTATCA TGAAACCAAC TTTTGGATCA 001520
001521 TTCCCTTTTT ATACAATTGT GTATTTATAG GGATACCTTC CTCTTCTCAC ATATTAATTG TATGTCATTA AAATCAGTTG 001600
001601 GCTATGTCAG TGTGTATTAT TCACCTCTTT TGCTAGCAAG GTTTGAGATG CTATATTAAC ATTTAAATCA TGAAAATGAG 001680
001681 CAAGTAAATA GAATAATATT TTATTAATGT ATGATATGTA ATACTTATTG TCTAAATCAA GTTTCCTATT TTTGGTTTAT 001760
001761 TTATTTTAGA AGAAAAATAA AATTATTTGG GCATTTTTGT TTATAGCTCA TTACAAACTA GAGTGATGAA TATATATATT 001840
001841 TACTAAAGCT AATTGAAAGA GTCATGCAAC TCAGTTGGGA ATTAACCACT CAATTCAATA GTAAAAGCCA TGCTTGGATG 001920
001921 TTTCTTTTGC ATGTTGCCTA GCattttata gatatttatt atttaaaaaa ataaaGATAT GTTTTTAATG AA
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Predicted Small Protein

Name NONHSAT081149_smProtein_401:547
Length 49
Molecular weight 5742.0956
Aromaticity 0.166666666667
Instability index 42.0520833333
Isoelectric point 9.12237548828
Runs 6
Runs residual 0.0405701754386
Runs probability 0.0457074721781
Amino acid sequence MKKCWWADLPFPCSIFQLIILLYLKNIFSFRRCSGMCIIQCCSFLTMK
Secondary structure LLLLLLLLLLLLLHHHHHHHHHHHHHHHHHLLLLLLEEEEHHHHHLLL
PRMN LLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLL
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