NONHSAT081149
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT081149 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1992 nt |
Genomic location |
chr21+:15588451..15600693 |
Exon number |
5 |
Exons |
15588451..15588603,15591874..15592046,15593418..15593490,15596759..15596858,15599201..15600693 |
Genome context |
|
Sequence |
000001 AGCCGGAGAA GGGGCGGGGT CTCAGCTCCT ACTTCATTCT ACGGCCGAGA CCGGAGGATG TTCCCTGCTC AGGAGGAGGC 000080
000081 CGACAGGACC GTGTTTGTTG GGAATTTAGA GGCCCGAGTT CGGGAAGAGA TTCTGTACGA GCTGTTCCTT CAGTTTCTTA 000160 000161 TAGGCGGGGC CACTAACCAA AGTGACTATA TGCAAAGACA GAGAAGGAAA GCCAAAGTCT TTTGGATTTG TCTGCTTTAA 000240 000241 ACACCCAGAA TCGGTGTCTT ATGCCATAGC TTTGCTGAAT GGAATTCGTT TATATGGAAG ACCAATTAAC GTGCAGTATC 000320 000321 GATTTGGGAG TTCTCGCTCT TCTGAACCAG CTAACCAAAG TTTTGAGAGC TGTGTTAAGA TAAATTCACA CAACTACAGG 000400 000401 AATGAAGAAA TGTTGGTGGG CAGATCTTCC TTTCCCATGC AGTATTTTCC AATTAATAAT ACTTCTTTAC CTCAAGAATA 000480 000481 TTTTCTCTTT CAGAAGATGC AGTGGCATGT GTATAATCCA GTGCTGCAGC TTCCTTACTA TGAAATGACA GCTCCACTTC 000560 000561 CTAATAGTGC ATCCGTGTCT TCCTCACTGA ATCATGTTCC AGATCTTGAG GCTGGACCCA GCTCATATAA ATGGACTCAC 000640 000641 CAACAACCAA GTGACTCTGA CCTTTATCAG ATGACAGCTC CACTTCCTAA TAGTGCATCC GTGTCTTCCT CACTGAATCA 000720 000721 TGTTCCAGAT CTTGAGGCTG GACCCAGCTC ATATAAATGG ACTCACCAAC AACCAAGTGA CTCTGACCTT TATCAGATGA 000800 000801 ATAAACGAAA GAGACAAAAG CAAACAAGTG ATAGTGATAG TAGCACAGAC AACAACAGAG GCAACGAATG TAGCCAAAAG 000880 000881 TTCCGAAAGT CTAAGAAGAA GAAAAGATAC TAGTATTACC TACAAATGAA ACTTACCTAC ACTGATCTTA GTTCTCTTAT 000960 000961 GAAAAAAATA AGATGTTATC CCATCAAATA AACAATGTCA TGGCTATCTT GTCTTTTGAA ATATGTAGTA ATAAGACTTA 001040 001041 TCTCTGGTTT GCTGTTCAAT TTTTGCCTTG AACGACAAAA GCTTTCTAAA AATAGTATAA TGTACCACTT TTTGTATTTG 001120 001121 TCATGATATT TTTGACCCAT TGGCAACAAA TAGACTATTG TCATTTTATT AGTACCAATG ATGAAATTTC ACCAAACTAT 001200 001201 TAATCAAAAG TCACTTATTG AACACATTGA TAAAGCATCA TGTTCCCTTT GATTATCCCC TATAACCAAC ACTCAACTAC 001280 001281 AAATAGGCTG GGATTCAATG TGGAGTGGTG GATTTCCTGA AAGAAAGTAG TGCAGATATT TAAGGATTGC ATATTGTTCC 001360 001361 TAATGAGGAT GTAATAAACA GGCATTAGTA CCCCTTTCTT TTAGTACCTA AATATGTTGT TTCTGAGCCA TATTCTTCTT 001440 001441 CAGGTTTATT TTATAAAGTG AGGACATATG ATAATGATAC CAAAGGAAAG ATAATTATCA TGAAACCAAC TTTTGGATCA 001520 001521 TTCCCTTTTT ATACAATTGT GTATTTATAG GGATACCTTC CTCTTCTCAC ATATTAATTG TATGTCATTA AAATCAGTTG 001600 001601 GCTATGTCAG TGTGTATTAT TCACCTCTTT TGCTAGCAAG GTTTGAGATG CTATATTAAC ATTTAAATCA TGAAAATGAG 001680 001681 CAAGTAAATA GAATAATATT TTATTAATGT ATGATATGTA ATACTTATTG TCTAAATCAA GTTTCCTATT TTTGGTTTAT 001760 001761 TTATTTTAGA AGAAAAATAA AATTATTTGG GCATTTTTGT TTATAGCTCA TTACAAACTA GAGTGATGAA TATATATATT 001840 001841 TACTAAAGCT AATTGAAAGA GTCATGCAAC TCAGTTGGGA ATTAACCACT CAATTCAATA GTAAAAGCCA TGCTTGGATG 001920 001921 TTTCTTTTGC ATGTTGCCTA GCattttata gatatttatt atttaaaaaa ataaaGATAT GTTTTTAATG AA |
Predicted Small Protein
Name | NONHSAT081149_smProtein_401:547 |
Length | 49 |
Molecular weight | 5742.0956 |
Aromaticity | 0.166666666667 |
Instability index | 42.0520833333 |
Isoelectric point | 9.12237548828 |
Runs | 6 |
Runs residual | 0.0405701754386 |
Runs probability | 0.0457074721781 |
Amino acid sequence | MKKCWWADLPFPCSIFQLIILLYLKNIFSFRRCSGMCIIQCCSFLTMK |
Secondary structure | LLLLLLLLLLLLLHHHHHHHHHHHHHHHHHLLLLLLEEEEHHHHHLLL |
PRMN | LLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLL |
PiMo | iiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTooooooooooooooooo |