NONHSAT081421
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT081421 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
2176 nt |
Genomic location |
chr21+:24722966..24842127 |
Exon number |
3 |
Exons |
24722966..24723089,24824849..24824952,24840180..24842127 |
Genome context |
|
Sequence |
000001 ATATATATTT TTTGAGACAG AGTCTCACTC TGTCACTAGG CTGGAGTGTA GTGGTGATCT CGGCTCACTG CAACCTCTGC 000080
000081 CTCCCAGGTT CAAGTGATTC TCCTGCCTCA GCCTCCTGAG TAGCGGAATA TGAGTCATCT CCAATGAGCG ACAGAGTCAC 000160 000161 ACAAGTCACC GGGCCACCGG ACAGGGGTCC TTCCCCTTTG AGGTGGCAAA GCTGGAGAGA GGCAGGACCC TTTGGCAAGA 000240 000241 ATCAGCATTT TAGATGTTAC TTCAGCACAA ATAAAAAACT AGAAGCGACA ATACAATCCA GAGTTGCCAT ATACAGGCCA 000320 000321 AGAAAACTTA TGACTCTGAT GGCATGCATG TAGAGCATAG AACTAAGCTA TGAGCAAACA AAGGTATAAG AATGATACAA 000400 000401 TGGACTTTGG GGACTTGTGG GGAAGGGCGG TAGGGAGGCG AAGGATAAAA GACTACCAAT ATGGTGCAGT GTATACTCCT 000480 000481 TGGGTGATGG GTGCAACAAA ACCTCACAAA TCACCACTAA AGAAATTACT TGTGTAACCA AATACCACCT GTACCCCAAT 000560 000561 AACTTGTGGA AAAATTTTTA AAAAGTAAGA AAATAAAAAT AAAAAAAGAA ATTAGCTGGG CGTGGTGGTG CACACCTGTG 000640 000641 GTACCAGCTA CTCGGGAGGC TGAGGCAGGG GAATTGCTTG AACCTGGGAG GCAGAGATTG CAGTAAGCCA ATATCTCACC 000720 000721 ACTGCACTCA AGCCTGGTGA CAGAGCGAGA CTCCATCTCA ATAAATAAAT AAAGTAAACA AAAATAAAAA CAGCTTCTGG 000800 000801 AATGTCTTCA AATTATTTCA AATGGTTGTA ATTGGAGCTG AAGTGACACT AAAGCCTATT TGAGTCAAAC CAGCAGAATC 000880 000881 TGTTTTTGTG CCTGATGTTC AGAGCTGTTT TAGCTATATT ATAGACTGAT GGCTTTCATT TTTCACTTCA AATTTCCCTG 000960 000961 TATAGTCCAC TATATTTTCT CAAGAGCTTA ATAAGGACAA AAGCTAAAAT GGAAGCTTAT TGCTGTCAAT GATTACCTGC 001040 001041 CTGTTAATGT GTGTGTAGGT ATATATAATG CTAACAGTGC GATTTTTTCT TAACTACTAT TTAAAGATGT GTCAATGGTA 001120 001121 ATTCATTTCA CAGAGAGTAA CACGAGCCTA AAAATAGAAT AGGAAGTACC AAATTATTCT TAAAGGAAAA ACTTTCGTTT 001200 001201 GCTGTTTTGA GGTGGACTGG ACAAACAAGC ATTTATTGTT AAATTATTTA CACTTAATTG TAATGCATTA TACATTTCAA 001280 001281 AATTATAGGC AAATCACCAA GATATATTTC TAGATATACG TGTTAAATGA GTTTGCTCGA AAGGAGACAT CATTTATAGT 001360 001361 AAGTTTTATT ATTATTATAG ACAAGAACAA ATGCAAGTGG AGCCTATCAA AATAAGCTAC ATTAAGCCCA GGTGCGGTGA 001440 001441 CTCATGCCTG TAATTCCAGC ACTTTGGGAG GCCAAGGCGG GTGGATCACC TGAGGTCAGG AGTTCGAGAC CAGCCTGGCC 001520 001521 AACATGGTGA AACCCTCTCT CCACTAAAAA TACAAAAAAC TTAGCCAGGC ATGGTAATCC CAGCTACTCG GGAGGCTGAG 001600 001601 GCAGGAGAAT TGCTTGAACT CAGGAGGTGG AGGTTGCAGC GAGCCAAGAT CGTGCCATTG CACTCCAGCC TGGGTGACAG 001680 001681 AATGGGACTC AGTATCAAAA AAAAAAAAAA AGAAAAGCTA CATTAAAAGT GAGCAGTCAA TAAAACTCTG AAAAAAAATA 001760 001761 CAAGCTGATG TCATAAATTC ATAAATAAAT ATATATTTTT GAGTTTGAGC TAATATTTGA AAAGACTGCA GTATATTACT 001840 001841 CATAACTGCT TATACTGTGT AACTGTGTGA AAATAATATA AAGGCAAGGA TGTTTGACAT GAGGACATTT TTATTCGAGT 001920 001921 GATTTCTCTA GAGATTGATA TTTCACAAGT ATAGAACTAA TATATATTTA TTTGTGATAC AATTTACATT TTATATAGCA 002000 002001 GTAATAATAA ATTAAAATCT TAGCTAATAC CATTTCAGCA AGGCAAGAAC AATATCCATG AATCTTTTAC TATTTCATAA 002080 002081 TTAAATGCCA GATCAAGAAA ATCAGTGAAA AATGAGCCTT AACCCTGATG GCTCATGCCT GTAATCCCAG CACTTTGGGA 002160 002161 GGCCGAGGCA GGCAGA |
Predicted Small Protein
Name | NONHSAT081421_smProtein_143:352 |
Length | 70 |
Molecular weight | 8030.2642 |
Aromaticity | 0.101449275362 |
Instability index | 53.8782608696 |
Isoelectric point | 10.5827026367 |
Runs | 11 |
Runs residual | 0.0200889654183 |
Runs probability | 0.0327841210194 |
Amino acid sequence | MSDRVTQVTGPPDRGPSPLRWQSWREAGPFGKNQHFRCYFSTNKKLEATIQSRVAIYRPR KLMTLMACM |
Secondary structure | LLLEEEELLLLLLLLLLLLLLLLHHHLLLLLLLLEEEEEEELLLEEEEEEEEEEEEEELL EEEEEEEEL |
PRMN | - |
PiMo | - |