NONHSAT081548
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT081548 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
572 nt |
Genomic location |
chr21+:28018989..28045423 |
Exon number |
4 |
Exons |
28018989..28019071,28037583..28037694,28040008..28040222,28045262..28045423 |
Genome context |
|
Sequence |
000001 TTTTTGGTAT AAGCCATGTT AACATAAAAA TCTTAATAGC TACATATGTA ACCATACATA ACTGTCTCCT TATGTTAAAT 000080
000081 AGCAGGTCCT TCACATCCCT TGTTGGCTGT GTTCCTAGGT ATTTTATTCT CTTTGAAGAG ATTGTGAATG GGAGTTCATC 000160 000161 CATGATTTGG CTCTCTGCTT GCCTTTGGTT AGTGTTTGCA GTGGCTGGTA CGAGTTTTTC CTTTCCATTT TTAGTGCTTC 000240 000241 TTTTAGGAGC TCTTGCAGGG CAGGCCTGGT GGTAATGAAA TCCCTCAGCA TTTGCTTGTC TGGAAAGGAT TTCATTTCTC 000320 000321 CTTTGCTTAT AAAGCTTAGT TTGGCTGGAT ATGAAATTGA GGGTTGAAAA TTCTTTTCTT GAAGAATGTT GAATATTGGC 000400 000401 TCCCAATCTC GGGAGTGATT GAATGATATT TGAAATCCAT TCCAACTTTA ATAACATTTG GGGATGAAAA ATTTCACCAG 000480 000481 TCAAAGCTTG TAGAGAGTTT CTATGCAGAA GCATGCCATT AATAATCACT ACCATGTAAA AATTACTGCT ACTTTCTTAT 000560 000561 TGCAAATTAA GT |
Predicted Small Protein
Name | NONHSAT081548_smProtein_71:274 |
Length | 68 |
Molecular weight | 7422.7065 |
Aromaticity | 0.179104477612 |
Instability index | 50.2343283582 |
Isoelectric point | 5.89300537109 |
Runs | 10 |
Runs residual | 0.0059388919278 |
Runs probability | 0.0700229641406 |
Amino acid sequence | MLNSRSFTSLVGCVPRYFILFEEIVNGSSSMIWLSACLWLVFAVAGTSFSFPFLVLLLGA LAGQAWW |
Secondary structure | LLLLLLLEELLLLLLLEEEEHHHHHLLLHHHHHHHHHHHHHHHHHLLLLLHHHHHHHHHH HHHLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLL LLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTTTTTTooooooo ooooooo |