NONHSAT081575
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT081575 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
630 nt |
Genomic location |
chr21-:28934419..28942696 |
Exon number |
2 |
Exons |
28934419..28934869,28942518..28942696 |
Genome context |
|
Sequence |
000001 CAGAGGCCAA TGAAAACACC TTCTCCACAG TGATCCTGTG GGGGAGAGAG TGAGTAAATG TGAAGACATA ATTTGTTGGC 000080
000081 TCCTCAATTT CTCCTGACTC TCAGTGGCCG AATATACCCT AATGGTCTGA AATCCTCAAC ATTTCTGGAC TGTGTTACCT 000160 000161 AGTCCCACCT TGAAAGTAAG GAGACAGAAG ATTCAGTATC AGAGTGATGC AACAAGTGGA AGACTTGAAA GGCCGTTGTT 000240 000241 GGCTTTGGCG ATGGAAGACC TCTATGAGCC AAGGAATGTG GGCAGCCTCA AGAAGCTGGA AAAGTCAAGG AAATCATTTC 000320 000321 TGTCCTAGAA GATCCAGAAA GAAACACCGT CCTATTGATT CCTCAATTTT TAAAACAATG AGGTCCATTT CAGACTTCTA 000400 000401 ACTTTCACAC TTATAAGAAA AATTTGTATT AAGCCACTAA ACTTGCTGCA ATGTGTACAG TAGGAAACTA ACATATTGGT 000480 000481 AGCCTTTATG ATATTCCTGT AACTAAATGC TCTGGACCCC AAATCAATAT AGATCTTATT AGTGATGTTT TGCACTGCAG 000560 000561 CAAATAGTTA TTGCAAAATT ATTGCAAATG TGTAGTTATT AAATCCCCCC CACACACACT TTAGTTAAAC |
Predicted Small Protein
Name | NONHSAT081575_smProtein_206:400 |
Length | 65 |
Molecular weight | 7760.8895 |
Aromaticity | 0.125 |
Instability index | 78.440625 |
Isoelectric point | 11.2892456055 |
Runs | 9 |
Runs residual | 0.00796875 |
Runs probability | 0.0403050108933 |
Amino acid sequence | MQQVEDLKGRCWLWRWKTSMSQGMWAASRSWKSQGNHFCPRRSRKKHRPIDSSIFKTMRS ISDF |
Secondary structure | LLHHHHLLLLEEEEEEELLHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLHHHHHHHHH HHLL |
PRMN | - |
PiMo | - |