NONHSAT083188
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT083188 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
631 nt |
Genomic location |
chr22+:17615063..17615693 |
Exon number |
1 |
Exons |
17615063..17615693 |
Genome context |
|
Sequence |
000001 cagcaagacc ccagactcta gaagaaaaag accaaaaaga tttctgttag gaacagaaca taatctgaaa tgatacaGAA 000080
000081 ctgtacttat aacagctcat ttatttctca gatagtccta tgaaacaaac attgccaatg ccaatttcac aggtgagaaa 000160 000161 atggaagctt ggaggagtga aggaagttgc ccaaggccct atagctagtg gatggccggg ctgggactcc atcgccaggc 000240 000241 ctgcagtcct ttcacttctg cCACGCTCCC TGGGGAGTGA AGGCAGAGGG AGGCGTTTTC ATGTCCAAGG GCCCTGTGGA 000320 000321 GGACTCACCA TAGGAGGGTC TCAGGGGCCA tctactatca tcttttgaag cctgccaagt gccaggcatg caggtgtggg 000400 000401 gacagggtta tgaaccaata tggacagagt ccatggagta gtagaagaca tagaatcagc aagtatatgt gggtcatggg 000480 000481 gcggtaggta ccatgaaaac attaagtagg gtaaggatga tggTGCTATG TTTACAGAAA GTCAAGGAAA TTGGAATGGC 000560 000561 ACATCCATCC ATCAGACCCA TAAGTGGGTC TGGGAAAAAA AGAAAGATGC TTggccaggc acagtggttc a |
Predicted Small Protein
Name | NONHSAT083188_smProtein_119:367 |
Length | 83 |
Molecular weight | 8664.0169 |
Aromaticity | 0.0609756097561 |
Instability index | 53.0268292683 |
Isoelectric point | 11.3814086914 |
Runs | 13 |
Runs residual | 0.0226348854398 |
Runs probability | 0.0434688081747 |
Amino acid sequence | MKQTLPMPISQVRKWKLGGVKEVAQGPIASGWPGWDSIARPAVLSLLPRSLGSEGRGRRF HVQGPCGGLTIGGSQGPSTIIF |
Secondary structure | LLLLLLLLLLEEEEEELLLLEEELLLLLLLLLLLLLLLLLHHHHHHLLLLLLLLLLLEEE EEELLLLLEEEELLLLLLEEEL |
PRMN | - |
PiMo | - |