NONHSAT083272
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT083272 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
751 nt |
Genomic location |
chr22+:18706468..18722070 |
Exon number |
9 |
Exons |
18706468..18706539,18708520..18708578,18709047..18709071,18709655..18709782,18712017..18712103,18717006..18717071,18719072..18719133,18719599..18719632,18721853..18722070 |
Genome context |
|
Sequence |
000001 GTGGAGGGGG CGGCATTGGG AGAGAGAGAC AAGGGGTCCG AGGGCCCCGC CCGGGGCCTG CCCAGCCTGC CCTGATTAAA 000080
000081 AAAAACAACA AACTGAGCAA ATTAGGTGCA GAAGGAATGT ACCTCAACAT AAAAGTGTAC AAATTTCAGT TATGCATGAT 000160 000161 AAGGGGGGAC TTACTTCTGG CATTTTGCTA TACATTTTCT ATATGCCTTA CAGCATTTTT GTCCATTTCC TGCATGATCT 000240 000241 CATTTGTATT TAGTTGATTT TTTGTAGCGA AGTGTTTTAA TTCCAAAAAA AAGAAAACTG GACACTTGAA TATAATAATG 000320 000321 CAGTAACTCT GGAGATGAGA CTCTCCTCTT CCTCAGGGTT TGCTGTTTTG GATTATATTT CATATATAAT TATATATATT 000400 000401 ATATTATATA TAATATCTGT ATAATAATAT ATATTATTAC ATATAATTAT ATTATATTAC ATTATATTAT ATATATCATA 000480 000481 ATATATTATA TAATATATAT AATATTGTAT TATTTAATAA TATATAATAT ATTCTGGCCA TTACAGTGAA ACCCTGTCTC 000560 000561 TACTACAAAT ACAAAAAATT AGCCAGGCAT GGTGGCAGCT GGTGTAGTCC CAGTGTGAAT TGGGATTCAG TTTATTCAGT 000640 000641 TTATTCCCAA ATTCCAAATT ATATATATAT ATATATAATT TCCTTTTACA TCCTGCATCC TTCAACGTTC CATCCCCCAC 000720 000721 CCCACAGATT AAGTTATTCC CCAGGGGAGA A |
Predicted Small Protein
Name | NONHSAT083272_smProtein_116:256 |
Length | 47 |
Molecular weight | 5359.5414 |
Aromaticity | 0.195652173913 |
Instability index | 43.5913043478 |
Isoelectric point | 8.45880126953 |
Runs | 9 |
Runs residual | 0.0342908902692 |
Runs probability | 0.0330526605037 |
Amino acid sequence | MYLNIKVYKFQLCMIRGDLLLAFCYTFSICLTAFLSISCMISFVFS |
Secondary structure | LEELEEEEEHHHHHHHHLHHHHHHHHHHHHHHHHHHHHHHEEEEEL |
PRMN | LLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHLLLL |
PiMo | iiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTTTTTToooo |