NONHSAT084940
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT084940 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
827 nt |
Genomic location |
chr22+:32517964..32529456 |
Exon number |
4 |
Exons |
32517964..32518104,32519881..32520021,32528208..32528494,32529199..32529456 |
Genome context |
|
Sequence |
000001 CTGGTGTAGC TGCTCCATTC CAGGCTTACA GGAGAAGGAG GAGGAGGCAC TTGCCACGCA CGCTGGAGAC TCGAGCCTGC 000080
000081 CTTGGCTCCC CTTGCTGCTG TGGTTGGTGG TGGCAAGGAA GACGACAGTG CAGCCAGGAT GGCTTTTCTG GCTTTGCCTG 000160 000161 CCCAGTTGCT CCGCGCGAAG AGGAGGGACT ACCTGCTGCT TGCTGGAGGC TAGAGCCTGC GACACTGTGG CTCGCCTCGC 000240 000241 TGTGGTTGGT GGCAGCGATG GGGACTGCAG AGTGCCAAAG CGGATATTTG ACCTCTGACC AGCCAGCATC AGTAGCCCAC 000320 000321 TGCTCCCTGG CCTGTGAGCA GCACCTCCAG CCTCTGCCCC TGCCACCCTC TCAACCAGGT GGTGGCCAAC GCAGTGGCAG 000400 000401 CGCTCTCAGA AATCGCCGAG TCTCACCCGA GCAACAACCT GCTCCATCTG AACCCACAGT TCATCAACAA GCTGCTGACA 000480 000481 GCCCTGATTG AGTGCACCGA GTGGGGCCAG ATCTTCATCC TGGACTGCCT CACCAACTAT ACGCCCAAGG ACGACCGCGA 000560 000561 GGCCCAGAGG TTTTCACTGT GTCGTCCAGA CTGGTCTCAC CCAACCAAAC TCCTGGGCTC AAGCAGTCCA CCCACCTCAG 000640 000641 CCTTGCCTGG CCTTGTTCTT TACATGCGTT ATGTCAGTTA AGCCCCCAGC AACCCTGTGA AGTAGGCATC ATCATCTTGA 000720 000721 TTCTATAGAT GAGGAAACTG AGGCTCAGAG TGATTTCAAC TTGCTGGGGG TTAGCAGGCA GCAGAACCAG GATTTAGATC 000800 000801 TTTCTCCTAC AAAAAACATG TTTGTTT |
Predicted Small Protein
Name | NONHSAT084940_smProtein_257:490 |
Length | 78 |
Molecular weight | 8044.7082 |
Aromaticity | 0.012987012987 |
Instability index | 109.005194805 |
Isoelectric point | 5.40216064453 |
Runs | 7 |
Runs residual | 0.0451722190853 |
Runs probability | 0.0406540994776 |
Amino acid sequence | MGTAECQSGYLTSDQPASVAHCSLACEQHLQPLPLPPSQPGGGQRSGSALRNRRVSPEQQ PAPSEPTVHQQAADSPD |
Secondary structure | LLLEEELLLLLLLLLLLLHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL LLLLLLLHHHLLLLLLL |
PRMN | - |
PiMo | - |