NONHSAT088659
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT088659 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
605 nt |
Genomic location |
chr3-:22852881..22853538 |
Exon number |
2 |
Exons |
22852881..22853115,22853169..22853538 |
Genome context |
|
Sequence |
000001 CTCAGAAGGC AATATGGTGG CAATTCTAAA ATGCCAGCTG GAAGAGAAGT AAAAGCTGCT GTTCATGGAG TGGGAAGATG 000080
000081 TGTCTGTCCC CAAGAGCAAA CTGAGGGAAC TTAGAAGGAG ATGTCGTGAA AAATGTCAAG ACAGCAGTCT GGGAGGCCAA 000160 000161 GGTGAAAAAG CAGCTGATGG CCCAGAAGTG ACCATGTGGG CCAACTACTG GGAGCACATG AAGGAGGTGC AGCAGATTTA 000240 000241 GGGCAAGATC TGGATTCTTC AGGGGCAGCT GCAGAACTCC ATCCTGAGGG ATACCTCGAA CCAAGCCATG AGCCATGTGG 000320 000321 GCGGCAAGCA GAATGTGGAG CTGGCCAAGC TCTGGCAGGA GCTCAGCAAG CAGAGGAGGA GTCCTAGCAG TCACAGGTCA 000400 000401 TAGTGAAACA TCTCAAAGGT ATTGTAGAGA AGCTAAAAGG GGAACATGAA AATTCAGATC AGGTGAGGGA ATGCACCTAG 000480 000481 CATCTGGAGG CAAAGCTGGA GAAGCACATG GAAGCTGCAG CACTGAGGGC CAGAACTACA CCAAAGAGGT GGCAGGGTTG 000560 000561 AGGCAACTTT AGATAGAATC TCAATCTCAG CCAGATGCAT CCAAG |
Predicted Small Protein
Name | NONHSAT088659_smProtein_314:448 |
Length | 45 |
Molecular weight | 4830.3243 |
Aromaticity | 0.0909090909091 |
Instability index | 45.8363636364 |
Isoelectric point | 11.3466186523 |
Runs | 7 |
Runs residual | 0.00401069518717 |
Runs probability | 0.0320488555783 |
Amino acid sequence | MWAASRMWSWPSSGRSSASRGGVLAVTGHSETSQRYCREAKRGT |
Secondary structure | LLLLEELLLLLLLLLLLLLLLLEEEEELLLLHHHHHHHHHHLLL |
PRMN | - |
PiMo | - |