NONHSAT089419
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT089419 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
overlapping(AS) |
Length |
566 nt |
Genomic location |
chr3-:45895903..45957204 |
Exon number |
4 |
Exons |
45895903..45896029,45896478..45896566,45954612..45954669,45956913..45957204 |
Genome context |
|
Sequence |
000001 ATGCTGGCAC TGAGGTTATC TAAGAGTTGA CAGCCCCATC TAAAGCCTTG AATGAATTAA GTCTTTTTTA GCTAAAAAAT 000080
000081 GAACAAAACC TGAGATGCAT GAGTGTCCTT ACCAAAAGGA AGTCCTTGTT TCTAGGACAG GTCTGTCTTC GGGCCTGTGG 000160 000161 GTCCATAGAA TCATCACAGA AAAAATGATT TCAGGAGGTC TCCCCCGCTT TCTGCTCCCA AGGCCGACTC TGACTGAGCC 000240 000241 TCGGAGGAGA GAAGGAAGCC ATTTCTGGGA GGCCAAAACG TCCGTCTTCC AGGCTCTTGC TGTAAGTCAG CCCACtttta 000320 000321 cagatgagga accaagaccc agggaagATG GGAAGGCAGA GAAAATCCAT CAAGTTGTAC CCTACCCACC CTTTGGTGAC 000400 000401 TTTTCCAAGA AGCTGGGCTA AGTTCCAGGA GAAAGCTCTg ctagagtgca atggcaccat ctcggctcat cgcaacctcc 000480 000481 gccttccagg ttcaagcgat tctcctgcct cagcctcctg aatagctgtg attacaggca tgcaccacta cacctggcta 000560 000561 attttg |
Predicted Small Protein
Name | NONHSAT089419_smProtein_323:520 |
Length | 66 |
Molecular weight | 7265.2412 |
Aromaticity | 0.0615384615385 |
Instability index | 53.0184615385 |
Isoelectric point | 10.5999145508 |
Runs | 9 |
Runs residual | 0.0118269230769 |
Runs probability | 0.0357121827711 |
Amino acid sequence | MRNQDPGKMGRQRKSIKLYPTHPLVTFPRSWAKFQEKALLECNGTISAHRNLRLPGSSDS PASAS |
Secondary structure | LLLLLLLLLLLLLLLEEELLLLLEELLLLLHHHHHHHHHHHHLLLEELLLLLLLLLLLLL LLLLL |
PRMN | - |
PiMo | - |