NONHSAT089485
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT089485 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1234 nt |
Genomic location |
chr3+:47263633..47264866 |
Exon number |
1 |
Exons |
47263633..47264866 |
Genome context |
|
Sequence |
000001 ttttagagtc tttctttgtt gctcaggctg gagtgcagtg gtacaatctt ggctcgctgc aactccactt cccaggttca 000080
000081 agcgattctc ctgcctcagc cttcggagta gctgggatta gaggcatcta ccaccatgcc tggctggtgt tgaactcctt 000160 000161 acctcaagtg atctgcccac cttggcctca caaagtcctg ggattacagg catgagccac cgtgcctggc cCAGAGTCCA 000240 000241 ATCTTAAAAT AAGGTTTGGC ATAAGAATTT GCCCTTAGAT TATTGGTTTG CCCttttttt tttttaattt tttgagacag 000320 000321 ggtctcactg tttcacccag CTGTAacacc cagctaattt tttaaaattt ttagtagaga tggggtttta ccatgttggc 000400 000401 caggctggtc tcgaactcct ggcgtcaagt gatccgcctg cctcggcctc ccaaagtgct gggattacag gtgtgagcca 000480 000481 ccgtgcccgg ccAGAGATTG GTCTTAAAAT GCCATGACAG TCAGCATTAA TTGGAGAGAG ATAATATTGG CCCAAATGCT 000560 000561 GCCTCTTCAA ATCCAAAATC CATTTTGGGG AGTGGAGAGG GAGACTAACA TTGGTtgtat gtgtgcatgc atgtatatgt 000640 000641 atgtgcgtgt gtgtgtgtAC AAGCTAATCA CCTATCAAAC ATAATGCTGG GTACATTCGC ATCTTTATTT TCATAGTTAT 000720 000721 TGTTACTGTC ATGGCTGTTT CAATTGGTTG AGGACCTGCT GTGCACTTCA CATCATTCCA CAAAGCCCTA CAGTGATCAT 000800 000801 GGttctatac acaaggaaag gaaggcagag aaattagaca acttactcaa tgtcaaatgt cagtaagata cagaatccca 000880 000881 atctaaactc aggtgtctct ggcccaaagc ctgtgatctg tccCTATTTT GTATTGCTTC ATAAAAGTGC AATCCACTGA 000960 000961 CCAACAATCA AGCCCAGACC GATACTCCCT GGGCCCAACT AGTGCGGACC AGGTGGATTG GAACTTCCCT GCAGTGCCAG 001040 001041 AGGAAATAGC AATAGAGGTA TCTGAGCTCT TTGGATTAAA GATAATGGAA CATAGGAGGG ACTCTCCAGA GCTTTTTGTC 001120 001121 CTACCTTGAA TCTCAGACCT CTAGAAAGAA ACTTTGGGTG CTATACTGAT TCAATTGTAT CCTTTTCATT ACACttttat 001200 001201 aatatatatt attaaaaata taggccaggt gcag |
Predicted Small Protein
Name | NONHSAT089485_smProtein_626:715 |
Length | 30 |
Molecular weight | 3159.745 |
Aromaticity | 0.103448275862 |
Instability index | 53.2379310345 |
Isoelectric point | 6.67572021484 |
Runs | 5 |
Runs residual | 0.0271551724138 |
Runs probability | 0.0269033739622 |
Amino acid sequence | MHVYVCACVCVQANHLSNIMLGTFASLFS |
Secondary structure | LEEEEEEEEEELLLHHHHHHHHHHHHHLL |
PRMN | - |
PiMo | - |