NONHSAT089838

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT089838

Source

NONCODE4.0

Same with

,

Classification

sense

Length

2526 nt

Genomic location

chr3-:50400286..50403213

Exon number

4

Exons

50400286..50402237,50402319..50402615,50402787..50402913,50403064..50403213

Genome context

Sequence
000001 GAAGGTGCTC CCTGGCCGGG AGGGCTCAGA AGAGAAGTAG GGCATGGCAT CGTCCTCTGC TGACCACCTG CACTCGGCTC 000080
000081 CCCGTGCGCT GCAGGTCCCT GTTCCAGCAG CTTCTCTACG GCCTCATCTA CCACAGCTGG TTCCAAGCAG ACCCCGCGGA 000160
000161 GGCCGAGGGG AGCCCCGAGA CGCGCGAGAG CAGCTGCGTC ATGAAACAGA CCCAGTACTA CTTCGGCTCG GTAAACGCCT 000240
000241 CCTACAACGC CATCATCGAC TGCGGAAACT GCTCCAGGCT GTTCCACGCG CAGAGACTGA CCAACACCAA TCTTCTCTTT 000320
000321 GTGGTGGCCG AGAAGCCGCT GTGCAGCCAG TGCGAGGCTG GCCGGCTGCT GCAGAAGGAG ACGCACTGTA Tcctgccccc 000400
000401 gccctccccg ccgcccgctc cccctctgcc ccgcgcgccc cctccgtgcc gccgccgccg tccgcctcct tgactcccca 000480
000481 cccatgcccA GCGGACGGCC CGGAGCAGTG TGAGCTAGTG CAGAGACCGC GATACCGGAG AGGCCCGCAC ATCTGCTTCG 000560
000561 ACTACAACGC GACAGAAGAT ACCTCAGACT GTGGCCGCGG GGCCTCCTTC CCGCCGTCGC TGGGCGTCCT GGTCTCCCTG 000640
000641 CAACTGCTGC TCCTCCTGGG CCTGCCGCCC CGGCCGCAGC CTCAAGTCCT CGTCCACGCC TCTCGCCGCC TCTGAGcacc 000720
000721 ctgccccacc ccacctccac tcccacctca cccGGCCTCT TCGCCTTTCC CACCCTCCTG CCCCACACTC CCCGCCTTAG 000800
000801 AGCCTCGTCC CTCCCTCACT GAAGGACCTG AGCTGGCCAG GCCCTGAGAG TCTGGTCTGC GCCTTGGGAT GGGGAGTCCC 000880
000881 AAAGCGGGAC GCCGCAGGTG TTTGGCACCC AAATCACATC TCACCTCCGA ACTGTTCAAG TGTCCCCAGA CCCTTCTTGC 000960
000961 CTGCTGGGCT CCCCCCAGTG GGATGGGACA GGGAGGCCAC ACGCACTGGT GCCAAAACCA GGCCTCTGCT GCCGCCCTTC 001040
001041 CTGGAGGCTG CCTATGTTGG GGGGGACCCT GCCTCAGCTG ACCCGGCCTC TCTGCCCCAC CCAAGCCCAA ACTTGGTTTC 001120
001121 TGTGAGAATA GTGGAGGAAG GTGAGATGGC CAGTTTGAAG CCTGTGCCTC CCAGCTTAAA TCCTAGCAGG AGAGAGGCTC 001200
001201 TGGGGCAGCC CCCATGGGCT CCTGCCCCTT TCAGGCCTAC AGCCACATCC CCAAGCCCAC CAGGTGTCAG GATAGTCACA 001280
001281 GTGATACCAG TTCAGACACT ACCCCATATA CACCTGGAAC ATTGAGGATG GAAACTGGAC TCACATTCGA CATACCCCAC 001360
001361 TGGGCACACG CACAAACACA CACACTATGG GGTGGGGTGG GTGTAGGGGC TTACAAAGCC TTACACAGGG CGAGGGGTTG 001440
001441 GTGGGAGGGT TGGCACCTGC ACACTCCATC TCCTGCTCAC CACCTGCCTC TAATCTGAGC TGCAGCCTGG CTGGTCCTCC 001520
001521 CATTTCTAAA GCTGAATGTC AAACAGTGCC AAATGCTGGG GCAGGGGGTG AAGAACCCTC TGTCCCACCC CTAGCCACCA 001600
001601 GTGTCCTCCA AGTGCCCCCT CACCTCTCCA GGTGCTCATT GTAACCATTT CTCACTAGTG TCAGGCCCCC AGTGGGACCA 001680
001681 CATGCCACTG CCTGCACCTT TCGGCAGAGG AACCCCCACC AGACATCACC CTTTGCCTTA GCAGGGGTGA CTTTGTCTCT 001760
001761 CCTGGCTGGG CCATCCTTCC GCCAATCTGG CCCTTACACA CTCAGGCCTG TGCCCACTCC CTATCTCCTT CCCACCCCTA 001840
001841 CACACACACT CCCTGCTTGC AGGAGGCCAA ACTGTCCCTC CCTTGCTGAa cacacacaca cacacacaca cacaGGTGGG 001920
001921 GACTGGGCAC AGCTCTTCAC ACCATTCATT CTGGTCATTT CCCCCAAAGG CATCCCAGCC TGGGGGCCAG TGGGGAACTG 002000
002001 AGGGCAAGGG GATATAGTGA TGGGGCTCAG ATGGACTGGG AGGAGGGGGA GGGTGATGCA TTAATTAATG GCTTCGTTAA 002080
002081 TTAATGTCAT GTTGCTTGTC GCTTTCTCAG TGTGTGTGTG TGGTCCATGC CCACTGCTGG TGCCAGGGTG GGTGTCCATG 002160
002161 TGCACCCGGC CTGGATGCCA GCTGTGTCCT TCGGGGGCGT GCGTGTAACT GTAGTGTAGT CAGGTGCTCA ATGGAGAATA 002240
002241 TAAACATATA CAGAAAAATA TATATTTTAA GTTTAAAAAA CAGAAAAACA GACAAAACAA TCCCCATCAG GTAGCTGTCT 002320
002321 AACCCCCAGC TGGGTCTAAT CCTTCTCATT ACCCACCCGA CCTGGCTGCC CCTCACCTTG GGCTGGGGGA CTGGGGGGCC 002400
002401 ATTTCCTTTT CTCTGCCCTT TTTTTGTTGT TCTATTTTGT ACAGACAAGT TGGAAAAACA ACAGCGACAA AAAAGTCAAG 002480
002481 AAACTTTGTA AAATATCGTG TGTGTGATTC CTTGTAAAAT ATTTTC
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Predicted Small Protein

Name NONHSAT089838_smProtein_200:472
Length 91
Molecular weight 10038.6079
Aromaticity 0.0666666666667
Instability index 71.5711111111
Isoelectric point 9.49578857422
Runs 14
Runs residual 0.01569664903
Runs probability 0.0472909884674
Amino acid sequence MKQTQYYFGSVNASYNAIIDCGNCSRLFHAQRLTNTNLLFVVAEKPLCSQCEAGRLLQKE
THCILPPPSPPPAPPLPRAPPPCRRRRPPP
Secondary structure LLEEEEEEEEELLLHHHEELLLLHHHHHHHHHLLLLLEEEEEELLLLLLHHHHLLLLLLL
LEEELLLLLLLLLLLLLLLLLLLLLLLLLL
PRMN -
PiMo -