NONHSAT090728
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT090728 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
816 nt |
Genomic location |
chr3+:93781842..93801017 |
Exon number |
3 |
Exons |
93781842..93781982,93783281..93783390,93800453..93801017 |
Genome context |
|
Sequence |
000001 GAAGAGGAAA CGTGAGAATG AAAGTGGATG CCCGCGAATC CCGGAAGTCA GACTGTTTTT TTCAGTTCCC TGGAGGCTTT 000080
000081 TTGATACTGA TTCGCGTACA CCTGTTGTTT GAAAGCTCTC AGCGGGACAA TGCTGACCCA GCTGAAAGCA AAATCAGAGG 000160 000161 GGAAGCTTGC AAAACAGATT TGCAAAGTTG TGTTGGATCA TTTTGAAAAA CAGTATTCCA AAGAACTCGG AGATGCCTGG 000240 000241 AATACAGTAA Gataatttct tctcatcctt caagatttaa cATATTGGAT AATATACAAA AGCTAATGTT GTTCCTGAAT 000320 000321 TAATAATCCT CTTAAACAAT AAGCTTAAAA GGAAACATGC AGGATTTaac ctttctaaga gataggaaag aaaatgtgaa 000400 000401 taaatggaga aacatattgt gatcaggatt ggaaaaattg actgcaataa agatgtgaaa tatctccaag tttaaagcat 000480 000481 ttaatataat cctaGGCAAG GTTACTATAT CTCTACCTGT CTACATACAC AAATATTGTA TAAATTATGT TTAACTGAAC 000560 000561 TTTTATTCCA AAGTTCATCT GAAAGAATAA ACATTCAAGA TAGCTTTGAA AATTCTGAAG AAAAAAAGAA GAACGAATAG 000640 000641 AGATTTGTCC TGTCTGATGT TAACTAATTG AAAGTGTTCT ACTCCTTTTT AGCTGATGGG TAGGCACATG ATGCAAGCCA 000720 000721 AGCCGCTCCT TCTGTATAAC TGTGTTTCCG ATCATTTTTT TATTACACAT GACTCAACAC TGGATAGATT TTTCAGCCTG 000800 000801 TTTGGAGGTA AGATTA |
Predicted Small Protein
Name | NONHSAT090728_smProtein_17:205 |
Length | 63 |
Molecular weight | 6982.869 |
Aromaticity | 0.0967741935484 |
Instability index | 51.5580645161 |
Isoelectric point | 6.53594970703 |
Runs | 11 |
Runs residual | 0.0237788018433 |
Runs probability | 0.0408617173324 |
Amino acid sequence | MKVDARESRKSDCFFQFPGGFLILIRVHLLFESSQRDNADPAESKIRGEACKTDLQSCVG SF |
Secondary structure | LLLLLLLLLLLLEEEELLLLEEEEEEEEEEEELLLLLLLLHHHHLLLHHHHHLLHHHHHL LL |
PRMN | - |
PiMo | - |