NONHSAT090916
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT090916 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
588 nt |
Genomic location |
chr3+:101583057..101583644 |
Exon number |
1 |
Exons |
101583057..101583644 |
Genome context |
|
Sequence |
000001 GTTTCTCAAG tatattagtt tcctaggact gtctaacaaa taaccacaaa cttggtggct taactcggag aaattcattt 000080
000081 tgtcatagtt ctggaggcca gaattctgaa accaaggtgt tggcagaacc atgtgccctc caaaggctct aggtggaatt 000160 000161 catgccttct attccagctt ctagtgactc caggtgttcc ctgccttgtg gcaatataac tccagtgtct gctccatctc 000240 000241 cacatggcct tctcctccct gtgcctcctc tctgtatatc tcttacaagg actcttacca ctgaatttag gggccacctg 000320 000321 agtaatccag gatgacctca tctcaatttt atttatttat ttatttttga gggggagtgt gcaatggtgc catcttggct 000400 000401 cactacaacc tccacctcct ggattcaagt agcctcccga gtagctggga ttacaggcat gcaccaccac acctggctac 000480 000481 acacctggct aattttgtat ttttaatagg gacggggttt caccatgttg gtcaggctgg tctcgaactc ctggcctcag 000560 000561 attatccgcc cactttggcc tcccaaag |
Predicted Small Protein
Name | NONHSAT090916_smProtein_161:334 |
Length | 58 |
Molecular weight | 5894.7799 |
Aromaticity | 0.0175438596491 |
Instability index | 73.1245614035 |
Isoelectric point | 7.78497314453 |
Runs | 7 |
Runs residual | 0.0311403508772 |
Runs probability | 0.0459661342016 |
Amino acid sequence | MPSIPASSDSRCSLPCGNITPVSAPSPHGLLLPVPPLCISLTRTLTTEFRGHLSNPG |
Secondary structure | LLLLLLLLLLLLLLLLLLLEELLLLLLLLLLLLLLLLEEEELLLLLHHHHHHLLLLL |
PRMN | - |
PiMo | - |