NONHSAT092999
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT092999 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
998 nt |
Genomic location |
chr3+:160283235..160285987 |
Exon number |
3 |
Exons |
160283235..160283428,160283795..160283941,160285331..160285987 |
Genome context |
|
Sequence |
000001 TCCCCGCCCG CCCCCCCGCC CTAACCCCAG CGCGACTGCA GCTCCGGCAA AGACAACTGT GGGGCCGGGC GGCGGCAAGG 000080
000081 CGACGGAATG TGCTGCCGGC TGAGAGGGGG AGGCAGCCTC GATCTGAGGG CCCCGGCGCT GCGGCCACGC CCATCGCCTC 000160 000161 CAGCCCGGCT CGCCCATTGG CTAACCAGGC TCCGAGAGAT CTGAGCTTCG CTGTCTCCCG GTCGGACGCT CGCAGCTGCG 000240 000241 TTCCCGGGCT GGGGCTCCGT GCCGTCCAGG GCCGGGTCTG GGGGCCAGGA CCTGCTGGGA TGACGTGAGT TGAGGAGGCT 000320 000321 CAGCGGAAAG CGACAGGAAA Gtaagctctc tgaagtcaag aaccatagtt gttttgttca ctactgtata ctcagcacct 000400 000401 aatagtactt ggcacataag tactcaggga ctatttgtca aatgcaagaa CATATGCCCC TAAAGCAGAA GTCAGGAAAA 000480 000481 CCAGAAAAAA TGCCTTTAAG TATTACAGAA ATGCCACAGG CCTCCACTTA AATTGAAAAG CAAGCTAACC CCTCTTGATA 000560 000561 AAAATGTGGA TTGAGATCAA GAAGCAGCTT CTCTGCTCCT TCTGGAATCT CCACCTGGTT TAGCCTGCTG CCTCCACTCC 000640 000641 TGCCTCCACC ATGTCCATCA GGGTGATCCA GAAGTCCTAC AAGGTGTCCA CCTTTGGCCC CCAGGCTTTC AGCAGCCACC 000720 000721 CCTACACTAG TGGGCCCAGT GCCTGCACCA GCTCCTTGAG CTTCTCCCTA GTGGGGAGCT TCACTGTGCA GCTTCTGGGG 000800 000801 TGGCCTGGGC GGAGGCTATG GTGGGGCCAG CAGTATGCGA GGCATCACCA CCATCACGGT AAACCAGAGC CTGCTGAGCC 000880 000881 CCCTTAACCT GGAGGTGGAC TCCAACATCC AGGCTGTATA CACCCAGGAG AAGGAGCAGA TCAAGACCCT CAACAACAAG 000960 000961 TTTGCCTCCT TCACAGACCA GGTATGGTTC CTGGAGCA |
Predicted Small Protein
Name | NONHSAT092999_smProtein_650:886 |
Length | 79 |
Molecular weight | 8718.7309 |
Aromaticity | 0.128205128205 |
Instability index | 59.5025641026 |
Isoelectric point | 10.0140991211 |
Runs | 10 |
Runs residual | 0.00547217010632 |
Runs probability | 0.0466966966967 |
Amino acid sequence | MSIRVIQKSYKVSTFGPQAFSSHPYTSGPSACTSSLSFSLVGSFTVQLLGWPGRRLWWGQ QYARHHHHHGKPEPAEPP |
Secondary structure | LEEEEEEELEEEELLLLLLLLLLLLLLLLLLLLLLEEEEEEEEEEEEEELLLLLEEEEHH HHHHHHLLLLLLLLLLLL |
PRMN | - |
PiMo | - |