NONHSAT093195
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT093195 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
554 nt |
Genomic location |
chr3+:170075466..170077861 |
Exon number |
2 |
Exons |
170075466..170075644,170077487..170077861 |
Genome context |
|
Sequence |
000001 GTGTAGCGAT GTGTGTGGGG TTCGGAGCCG CGCCGGCACA GCCGAAGGGA GCGggcgagc ggcgacggcg gcggcggcgg 000080
000081 gcacaggtgc ggctccggct tacggcggcg acgcggcgga ggcggcggGA GGCCAGAGGC GCTCACCCTC CTAGGAGCCC 000160 000161 GACGGCGGCG ACAGGGGCGA TTAATTAAAA GAAGAATGAA CTATAATCCT TGAAGATAAC TGGGCAATTT TTTAAGTCGG 000240 000241 AGGCTGTTCT TACTGGTGTG AGGATTTACA CACGTCTTCA GTTTTTCAGC ACAGACCAGC AGACCATCAT TTTTAGAGGA 000320 000321 AATACTCCCT CTGCCCTCCT TTTTGGTTTC CTTGGTGGTA AAGATTAAAT TTGGTTGCAT CATTTTGACT TGTGTTTGAG 000400 000401 TCTAGATTTT ATGGCACAAG GAATGGCATA AACTTTTCAT GTGTTTTGGT TAAAACAAAC CAGACCATTG CATTGACCCT 000480 000481 GGACATCTTT AATTGAGAAA TTGGTAACTT TATTTTAATA TGTATATCTG AAGAATTCAA GAAAACAAAG GCAT |
Predicted Small Protein
Name | NONHSAT093195_smProtein_8:187 |
Length | 60 |
Molecular weight | 6502.4461 |
Aromaticity | 0.0169491525424 |
Instability index | 119.581355932 |
Isoelectric point | 12.4776000977 |
Runs | 7 |
Runs residual | 0.0258124708443 |
Runs probability | 0.0348752113458 |
Amino acid sequence | MCVGFGAAPAQPKGAGERRRRRRRAQVRLRLTAATRRRRREARGAHPPRSPTAATGAIN |
Secondary structure | LEELLLLLLLLLLLLLHHHHHHHHHHHHHHHLHHHHHHHHHHHLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |