NONHSAT093627
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT093627 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
543 nt |
Genomic location |
chr3-:182668571..182674095 |
Exon number |
4 |
Exons |
182668571..182668787,182673173..182673377,182673673..182673716,182674019..182674095 |
Genome context |
|
Sequence |
000001 ATGAGCTCCC AGAAAGGCAA CGTGCCTCAT TCCAGGCCTC AGAAGCACCA GAATATATTT AGCTTCAAAA ATGACAATTT 000080
000081 GATAAGCATG TTTAGACCAA GAAAAGTAAC ACAAAACCAT GCCTCCTGAT GGAGTATGTC AGCGCTGTAA AGAAGTTCTT 000160 000161 GAGTGGCATG TAAAATATAG CAAATACAAA CCATTATCCA ACCTAAAAAA TGTGTTAAAT GTTTACAAAA GACAGTGGAG 000240 000241 GATTCTTATC TCATAACGTG TAGACCATGT GCCTATGAAC TTGAAGTTTG CGCAAAATGT GGGAAGAAGA AGACATTGCT 000320 000321 ATTCTGagtt ttgttcttgt cacccaggct ggagtgcaat ggcgccatct tggctcactg caacctttgc ctcccggatt 000400 000401 caagcgattc tcctgcctca gcctcccgag tagttgggat tacaagtgcc caccatcgtg ccggccaatt tttttgcatt 000480 000481 tttagtagag atggggtttc gccatgttgg tcaggctggt ctcgagctcc tgaccccagg tga |
Predicted Small Protein
Name | NONHSAT093627_smProtein_296:484 |
Length | 63 |
Molecular weight | 7163.2843 |
Aromaticity | 0.145161290323 |
Instability index | 78.1951612903 |
Isoelectric point | 6.69317626953 |
Runs | 9 |
Runs residual | 0.00847926267281 |
Runs probability | 0.0459871636343 |
Amino acid sequence | MWEEEDIAILSFVLVTQAGVQWRHLGSLQPLPPGFKRFSCLSLPSSWDYKCPPSCRPIFL HF |
Secondary structure | LLLLLLEEEEEEEEEEELLHHHHHHLLLLLLLLLLEEEEELLLLLLLLLLLLLLLLLLEE EL |
PRMN | - |
PiMo | - |