NONHSAT094422
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT094422 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1207 nt |
Genomic location |
chr3-:197340899..197354752 |
Exon number |
6 |
Exons |
197340899..197341493,197342435..197342556,197346611..197346759,197350091..197350253,197350983..197351058,197354651..197354752 |
Genome context |
|
Sequence |
000001 GACTGGCGGG ACTGCGCGGA GGCGACTGCA GACGTATCGG GGGTCCGGAG CCTGTCGCGG CTGCTAAGCG CTCGGCGCCT 000080
000081 GGCGCTGGCG CTGGCCAAGG CTTGTTGCAA ACAGGAACCC GAGGTGTTCA CTTCACTGTT GAAGGAACGA GAGGGCATCT 000160 000161 GCTAAAGTTT CAGATTCCAT TTCTGCTCAG TATCCAGTAG TGGATCATGA ATTTGATGCA GTGGTGGTAG GCGCTGGAGG 000240 000241 GGCAGGCTTT GCGAGCTGCA TTTGGCCTTT CCGAGGCAGA GTTTGATACA GCATGTGTTA CCAAGCTGTT TCCTACCAGG 000320 000321 TCACACACTG TTGCAGCGCA GTCTCTGAGA TATGATACCA GCTGTTTTGT GGAGTATTTT GCCTTGGATC TCCTGATAGA 000400 000401 GAACAGGGAG TGCCGTGGTG TCATTGCACT GTGCATAGAG GACGGGTCCA TCCATCACAT AAGAGCAAAG AACACTGTTG 000480 000481 TTGCCACAGG AGTCAAGAAA CTTTTCTTTT GAGCTATTGA CAGCTTTTAA CAAGTTATTA TACTCCTATG AACAAAATTT 000560 000561 GGAGCATATT TGTTTCTCTC TGCCTGATTT CTCCTGAATT TGGAAACTAT TTGACATGAG GATTCTCAAC CTGATAAAAA 000640 000641 TGAGCTTTCC TAATAACTCA AGACCCATCT GCCTAGGAAT AAACCATCCC AGCTGTGAGA GACCAGACGA AACCTGAGAC 000720 000721 CAGAGACTCG TTTTCTTCTA AAATGCTTTC TCCAAAAGAT TTTTAAACAG AAAAAGGGGG AAATGTGAAA GGAAAAGAAA 000800 000801 ACTTGAGGCC CCCAAAATCA CTAAGCTAAA AGGAAAAGTC AAGCTGGGAA TGGCTTAGGG CAAACCTGCC TCCCATTCTA 000880 000881 TGCAAAGTCA TCCCTCCGTG CACTGAGATA AATGCTTATC TAATTGCCTC CTTTGGAGAG GCTCATCAGA AACTCAAAAT 000960 000961 AATGCAACCA TTTGACTCTC ACCTACCTGT GACCTGGAAG ATCCCTCTCT GCTTGAGTTG TCCTGCTTTT CTGGATGGAA 001040 001041 CCAATGTTCA TCTTACATAT ATTGATTGAT GTCTCATGTC TCCCTAAAAT GTATAAAACC AAGCTGTGCC CTGACCACCT 001120 001121 TGGGCACATG TCGTCAGGAC CTCCTGAGGC TGTGCCACAG GCATGCAGCC TCAACCTTGG CAAAATAAAC TTTCTAAATT 001200 001201 GACTGAG |
Predicted Small Protein
Name | NONHSAT094422_smProtein_1034:1201 |
Length | 56 |
Molecular weight | 6094.2629 |
Aromaticity | 0.0545454545455 |
Instability index | 78.0181818182 |
Isoelectric point | 6.79901123047 |
Runs | 7 |
Runs residual | 0.0242424242424 |
Runs probability | 0.0431271607742 |
Amino acid sequence | MEPMFILHILIDVSCLPKMYKTKLCPDHLGHMSSGPPEAVPQACSLNLGKINFLN |
Secondary structure | LLLEEEEEEEEELLLLLLHHHLLLLLLLLLLLLLLLLLLLLHHHHLLLLLLLLLL |
PRMN | - |
PiMo | - |