NONHSAT094467

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT094467

Source

NONCODE4.0

Same with

,

Classification

intronic(AS),sense

Length

687 nt

Genomic location

chr3+:197680434..197682722

Exon number

2

Exons

197680434..197681018,197682621..197682722

Genome context

Sequence
000001 agtcatcccg tgatcacttc atggcatttc ccctcccttt ccagtctttg ttccatggtc acctcagtga gaccttcctt 000080
000081 ggctatttaa aatggcaggt aattcctcct ttctgtacac acaaatatcc tcacacttgt ccttttttgc tattttttca 000160
000161 atattgcctc tgttatcatc tgacctatgt attttcctta aacttacttg gttatcatgt gaaagatttt tgttttatag 000240
000241 ctgctgtatt ttacagaagg gcctggcata caatagttac tcgataagta tctgttgaat gaatgGTGTT CTAGGCAttt 000320
000321 aaagtttctc aggtgatgaa gtgggtaacc agggttgaga gccactCGTG TAGAGGTCAC CTTGAATTTG TATCCAACTA 000400
000401 TATCAGCTTG TATTCCTCTT CTTTCCCTTT TTAAAATCAG CAACACAGTC ACTCCTGGCG GCAAACCAAA CAAAACCAGA 000480
000481 GTCATCTGGG GAAAAGTAAC TCGGGCCCAT GGAAACAGTG GCATGGTTCG TGCCAAATTC CGAAGCAATC TTCCTGCTAA 000560
000561 GGCCATTGGA CACAGAATCC GAGTGATGCT GTACCCCTCA AGGATTTAAA CTAACGAAAA ATCAATAAAT AAATGTGGAT 000640
000641 TTGTGCTCTT GTATTTTTAA GTGGATTAAA AAACTTACTA CCTTAAA
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Predicted Small Protein

Name NONHSAT094467_smProtein_20:286
Length 89
Molecular weight 10600.4153
Aromaticity 0.238636363636
Instability index 48.02625
Isoelectric point 8.91534423828
Runs 10
Runs residual 0.0177272727273
Runs probability 0.0296149090266
Amino acid sequence MAFPLPFQSLFHGHLSETFLGYLKWQVIPPFCTHKYPHTCPFLLFFQYCLCYHLTYVFSL
NLLGYHVKDFCFIAAVFYRRAWHTIVTR
Secondary structure LLLLLLLHHHHLLLHHHHHHHHHHHHEELLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHH
HHHHHLHHHHHHHHHHHHHHHHHHHLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHH
HHHHLLLLHHHHHHHHHHHHHHHHHHLL
PiMo oooooooooooooooooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTT
TTTTiiiiTTTTTTTTTTTTTTTTTToo