NONHSAT094943
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT094943 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
930 nt |
Genomic location |
chr4-:4562361..4571229 |
Exon number |
2 |
Exons |
4562361..4562606,4570546..4571229 |
Genome context |
|
Sequence |
000001 GGGAGATTCC AGGTCAGACA GAACTCAGCC CCAATTAAAG GGGACTGAGG CTTCTGAAGG GAGAACAGAG AGAGAACAAA 000080
000081 AAGGGATGCT GGGGAAGTGA AGAAGGGGGA ACAAAAAGGG CCTGGGGTTT ATGTGGAAAT GGAAATTACA GAAGGGGTCA 000160 000161 CTAGAGAATT CCTGAAAACA ATTTGGTGCA AGCTGGGTTG GGACAATGCA CATTTTGTGG TTtggtagca ttgcattttc 000240 000241 ttgagtaaag acttagtgca aggcaggggt ggggccacct ttagagacac agcctagagc aggcggagcc agcctgaaat 000320 000321 gtggtcaagt ctcAAGCATG GTGCCTAAGG GAGCGATCTG TGCCTCCTGA GAGCTCACTG TTCACAGGCC CAAGCCTTCA 000400 000401 AACTCTAGAG CAAGGCACAG GGAGCGGGAT TTTGCAAATT ATTTTTCAAA GGAAGTCTCA GGGGCAAAGG AGAAGCCCAT 000480 000481 TGTCTTCTCC TTTGTATCAT TTGTATCATT GTCTTCTCCA TTGTATACAT TTCTTTTGTG TCTTGTCCTC TCACAGTGTC 000560 000561 CATCAGAAGG CCCCTGCTGA GTAGTTggca gggtggctgc acataatgga aagcacataa gcttgaagcc agacagatgg 000640 000641 gagttctaac cccagccctg ccacttattc ccaggtgaca ctgaTGATGT CCAAAGAgaa gggaggagga aggatgaaag 000720 000721 gaaagacaga ggaggaagga agagaagaaa gaagAGTGGC CGGCACAAGG GCTTGGAGAT CCCTGAAGCT GTTTTCCTTT 000800 000801 CTCCTCACCC CCACAGGGAG GGATCCACAT CGTTGTGGGG TTTTTGttgt tgttgttttt gtttttgttt ttTTGCCTCC 000880 000881 CTTCATCAAA GCATTCATTG TAGTGTATGG TAATTGTCTC TGAATGTAAC |
Predicted Small Protein
Name | NONHSAT094943_smProtein_683:922 |
Length | 80 |
Molecular weight | 8981.5698 |
Aromaticity | 0.126582278481 |
Instability index | 42.4367088608 |
Isoelectric point | 10.1327514648 |
Runs | 10 |
Runs residual | 0.013698630137 |
Runs probability | 0.039427662957 |
Amino acid sequence | MMSKEKGGGRMKGKTEEEGREERRVAGTRAWRSLKLFSFLLTPTGRDPHRCGVFVVVVFV FVFLPPFIKAFIVVYGNCL |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLHHHHLLLHHHHHHHHHEEEELLLLLLLLEEEEEEEEEEE EEELLLLEEEEEEEELLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHH HHHHHHHHHHHHHLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTT TTTTTTTTTTTTToooooo |