NONHSAT095797
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT095797 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1375 nt |
Genomic location |
chr4+:24330387..24334884 |
Exon number |
2 |
Exons |
24330387..24330881,24334004..24334884 |
Genome context |
|
Sequence |
000001 GCTTTAAACG GTCTGATTCT TTGAGGGCAG TGGAGGGGAA GCAATGTCCT TTTTGGCTGC ATGCACTGCT TGGCCATTCA 000080
000081 GTCCATGAAC TGGTTAGTGC AGGTGGCTTT CACGGGTGCT GGAAAATTAT AGTCTCGGAA CCAAACTTGT ATCAGTAAAC 000160 000161 ACACTGCCTC GGACTGGCCA CTTCAATTCC GTTGAACCTT CCACAGTTCA AACAGGGCAC CTGTGTCAGT CTGAGAGCTT 000240 000241 AGCAGGCACA GCTGACCCTG GCTGCCCAGC AAACAGTTTA TGTTGGGGAG CAATCTAGAG ATTTCCTGAG ATAAGGATGC 000320 000321 TATTACGGGC TGACAAATGT GGAACGGAGC AGAGTGGGCA GCTTTTGTCC AGACTGACCC AGGGTGAGAA TGCTGGGATT 000400 000401 ATTGCTGATT GGGGATAAAT GGCAACCGGT GATTTATTTG TTCAAGTGAA ACCAGCCAAG TTCATCCCTC AACACCATCT 000480 000481 CCCATCTCTT TAAGCTGCAG GGATGATGAA ATGAGAATAT TAAATCCAAT GGAGGTCCAT TTTGCTCACT ATGGTAAACA 000560 000561 CAGAAATTCA TCCTGGTATC TAGAACAGAG TAAATCCTCA ATAAACACTT GTGAATGAAC AAAGGAACAA ACCAATGAAT 000640 000641 TAATGAAACA TCTTTACCTT GTGTCTCATT TCTTATCACT TATCATTTCA ATATGTGCAA GAACTCAGAG TACATTTTTC 000720 000721 ATTTTGTGTA TGTGAAACTT ACCAACAAAA TAGTAGCTAA AAAGTTGTAA AACTTACAAG TTTTCAACAA CAAAGTTGAA 000800 000801 ATGTAAATGA ACATCTGTGC TCCCCGAAAT ACATAATAGG CAAGTAGAGA AATCTAGAAA GGAAAGGCCA CAGGCTGAGG 000880 000881 GAGTTAACAG ATGCGATAGT CTATTAACAT TAATTTTCTG AAGTGTATAT TTCAGAAATT TGCTCAGCCT CGCTGAGTCT 000960 000961 CAGTTTCCTC AACTGTATAC TGAAGACAAT TTCTTTATTT ACCAACCTGA AATATTCATA GTGAGTCTAA GATGGAAGAA 001040 001041 CAGATGAGTA AATACTTTAA AAGTGTAATA AGAGGCCAGG CGTTGTGGCT CACACCTGTA ATCCCAGCAC TTCGGGAGGC 001120 001121 CAAGGCGGGC AGATCATTTG AGGTCAGGAG TTCGAGACCA GACTGGCCAA CATGGCAAAA CCCTGTCTCT ACAAAAACTA 001200 001201 CAAAAATTAG CTGGGCGTGG TGACACGCGC CTGTAATCCC AGCTACTCAG GAGGCTGAGA GGCATGAGAA TCACTTGAAC 001280 001281 CCAGGAGGTG GTGGTTACAC TGAGCTGAGA TTGTGCTGCT GCACTCCAGC CTGGGCAACA GAGCAAGACT CCATCTCAAA 001360 001361 AGAAAAAAAA AAGTG |
Predicted Small Protein
Name | NONHSAT095797_smProtein_1031:1222 |
Length | 64 |
Molecular weight | 7366.3995 |
Aromaticity | 0.126984126984 |
Instability index | 54.1507936508 |
Isoelectric point | 10.2716674805 |
Runs | 11 |
Runs residual | 0.0296404275996 |
Runs probability | 0.0382762441586 |
Amino acid sequence | MEEQMSKYFKSVIRGQALWLTPVIPALREAKAGRSFEVRSSRPDWPTWQNPVSTKTTKIS WAW |
Secondary structure | LHHHHHHHHHHHHHLLLEEELLLLHHHHHHHLLLLEEEELLLLLLLLLLLLLLLLLLEEE EEL |
PRMN | - |
PiMo | - |