NONHSAT096184
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT096184 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1085 nt |
Genomic location |
chr4-:41991356..41992440 |
Exon number |
1 |
Exons |
41991356..41992440 |
Genome context |
|
Sequence |
000001 CAGACTCCCA AAGTGGGGAG GGCGTGGCTG CAGGGGAAGT TTGGTGTCTG CCGTCTTCTT TTGCACCTGT ACTTTTGCGC 000080
000081 TTGGTTGGAA ATCACGTAAA CTGTTTACAT CTTGTTCAGC CAGGAAAGCT GTCCTTTGGG AGTTCTACTT ATTCCTTTTT 000160 000161 TTCTGGACTC GAAACCGGGG CCGTGGTTTC GGAAATGGGA GGAAAGATGG GAAGGATGGA CGCAGGTTTT CTGAGCCTCT 000240 000241 CTACCTAGAG CCTGCCAGGA TAAACCCAAA TTAGAACCAA CATGTCCAGT ACTCTCCGAA CGTCTGCCAC GTACATCGTT 000320 000321 CTCCTTGTTA ACACCAGTGT GTATCCAGTA TCATAAAGGC AAGTACACAC TTCGGAATCA GCTACTTGCC CTACTAATCT 000400 000401 GTGAACCTCA GATTTTTGCC TGCAATATAA GAGGTTTTAT GTTCATGACA AGTTAGGGTA AACGGAGGTA TGCAGACTTC 000480 000481 GAAACATTTT GGTCCCAGGG AGAAAGAAAC CTGAACAGTA TCCACGTTAA Ctgtttctct ctgccatgct cattcagctc 000560 000561 ttaactcaaa ctcaagagag gccttccttg accaccctag ctatggtagt cctggtcatt ctctacccgg ctgtcctata 000640 000641 tacttttctt caaaacgctt atcactattt gagatttttt tttctatttt gtgtcctaga atagaaaata agcatcatga 000720 000721 tgctggaatc ttgtctattt tgtacatggc tgtataaagc cgctaaaaca atgcctggca AAAATAAATT GAATGGAATG 000800 000801 TATGGTGGTT TGTTTTAAAG TTAATCTGAG TCGCTTATCT ATATTACTGC AAAATAACTA TCTCGGGGAA ATTTAGTATG 000880 000881 TCCTTAATTT TTAAAAAAAT CAACAAGTCT CTTATACTAA TTGAGATAAG TATAACCAAA TGAGGAAAGA GATTATCGTT 000960 000961 AAGAATGGTA AGCAAATTTA ATTTCCTATG ACAAACATAA CTTAAAATAT TCAGTGGACA AACATTAAAA AATGATGTCC 001040 001041 CATAAATGTA GGCTCAATAT TACTAAAAAA TCTGAATATT ACTGG |
Predicted Small Protein
Name | NONHSAT096184_smProtein_545:703 |
Length | 53 |
Molecular weight | 6186.3924 |
Aromaticity | 0.173076923077 |
Instability index | 47.8865384615 |
Isoelectric point | 6.52435302734 |
Runs | 8 |
Runs residual | 0.00347674923946 |
Runs probability | 0.0371732026143 |
Amino acid sequence | MLIQLLTQTQERPSLTTLAMVVLVILYPAVLYTFLQNAYHYLRFFFLFCVLE |
Secondary structure | LHHHHHHHLLLLLLHHHHHHHHHHHHLHHHHHHHHHHHHHHHHHHHHEEEEL |
PRMN | LLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLL |
PiMo | oooooooooooooooooooTTTTTTTTTTTTTTTTTTTTTTiiiiiiiiiii |