NONHSAT096190
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT096190 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
860 nt |
Genomic location |
chr4-:42157456..42158315 |
Exon number |
1 |
Exons |
42157456..42158315 |
Genome context |
|
Sequence |
000001 aggtgctatt agccaccgta cctggctaat tttttatttt ctgtacagat agggtgtgac tatgctgccc aggctggtct 000080
000081 caaactcctg gatgcaagga attctcccac cttggccttc caaagtgctg ggattacagg catgagccac tgtgcccagt 000160 000161 ctcccaccct ggtttttcat catagtttgt ttagagacgg gcctggctct gtcctccagg ttggagtaca atggcacaat 000240 000241 cacagttcac tacagccttg gactcctggg ctcaagtgat cctcctgtct tagcctccca agaagctaga agcacagatg 000320 000321 cacaacatca tgctcagtta ttattatttt tttgtagaga cgggctctca ctatgttgtt caggctggtc tcaaactcct 000400 000401 gggctcaagt gatcctcccc attcagcctc ccaaagtgct gagattacca gcatgaacca ctgtgcctgt ccctcatcat 000480 000481 agttatttct atttgaaata atatttttca gttagttact ggtttatttg tttacctgct ccccccaaat ccataatagt 000560 000561 aggaccttgt gatctgggta acattatatc ccccagtgct tagaaaggta cctagcacat ggtagacact caataaatat 000640 000641 ttgtggaata aatACCTGGG ggaataaggt ccctgaaggt agcaagatcc ccatcagtgg aggcatttaa acatggtttg 000720 000721 cacaaccact tgccagggCC ATCGAAAACT ATGGGCAGAG GCTTAGTCAC AAGAATAAAA GACTGCATAG GTCCCTTCTA 000800 000801 GTCCTATGTA CCTACGATTA TATGGCCACC ACACCTTTTT TGCTATGCAA TGGGAAAAGC |
Predicted Small Protein
Name | NONHSAT096190_smProtein_317:481 |
Length | 55 |
Molecular weight | 5895.5685 |
Aromaticity | 0.111111111111 |
Instability index | 82.1759259259 |
Isoelectric point | 5.97357177734 |
Runs | 9 |
Runs residual | 0.00397470641373 |
Runs probability | 0.0396376768927 |
Amino acid sequence | MHNIMLSYYYFFVETGSHYVVQAGLKLLGSSDPPHSASQSAEITSMNHCACPSS |
Secondary structure | LLEEEEEEEEEEEELLLHHHHHHHHHHHLLLLLLLLLLLLEEEELLLEELLLLL |
PRMN | - |
PiMo | - |